Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0350 ATGGACCACGATCGTCGTTCCCCGGGCGCTGAATCCTTGGAATTAGAAAAGGGGGACTCAAAAGAGAAGAAGACTAATGCAAAAGGCAGAAGGGCTCGGACTGGGTATTCTGATTCCATAAGAGAATTGGACTTGAATTCTTTATACATTAAAGAAGAAGGTTCAGCCGAGTGGCCTGCTAGCAGGGACATGCCTGAGGACTGCCGGGGAAGTTTAGAATGTGAAGCCCTTCCTTCCAATGCCAGCACTTCCGATTCAGAGTTAGCAGATGCTGCAAACAATGCTCAGTGGCGTGGCTTGCTTCGTTTCATGAAGAAAGGATCCCACATGCGCTTCGCTCATCCACCTAAAAACATTCCCAAACTCACCCGAAGAACAGTTAAACGAATCAAGGAAGACCTCATCCCTGGCCTACATTCTTCAGTTCCAGCTCCTTCTCTTGATCCAGATTTTTACTGCTTTAAGTCTTCATGGATAAATTTTTCCTTTACACAGCTCAAAGCTGCCACCAAAGACTTCAGCGATGAGTTGTTGATTGGGAAGGGAGGTTATGCTGAGGTTTACAAAGGAAAAATGGAAGACGGGACGTATGTTGCAATCAAACGGCTAACAAGAGGAAGCCAAGAAGAAATGACAGCTGATTTCTTGTCTGAACTTGGTATTATAGTGCATGTTGATCATCCCAATATTGCCAGATTGATTGGTTATGGCGTGGAAGGGGGAATGTTTCTTGTTCTTCAGTTGTCTCCACATGGCAGCCTAGCAGGCATTCTTTATGGACCCCGAGAGAGACTGGATTGGAACGTGAGATTTAAGGTTGCTTTAGGGACTGCTGAGGGCCTTCAATATCTGCATGAGGGATGTCAAAGAAGGATCATTCACAGAGATATCAAGGCTGCTAATATTCTGCTATCAGAGGATTTTGAACCTCAGGTATCTGATTTTGGGCTTGCAAAGTGGTTACCTGACCAATGGACTCACCATACCGTGGATAAAATTGAAGGCACATTTGGTTATCTTCCTCCGGAATTTTTCATGCATGGTATAGTTGACGAAAAGACTGACGTGTATGCTTATGGAGTGTTATTATTGGAGCTCATTACAGGACGACAGGCTCTGGACAGCTCTCAGAAAAGTTTGGTGATGTGGGCAAAACCTTTGCTATCTGTAGATAAAATCAAAGAGCTCGTGGATCCATGTCTACGCAATGCGTATGATGAAGAACAGATGAAAATTGTTGTAATGACGGCTTCATTGTGTATAGAGCAGTGTTCAATTGAGCGACCACACATGAGCCAGGTATTGAAGACTCTGAAACGGGACGAAGGGGGCTTGAAGTTCGTAATGGAGCGGCAAAAGTCAAAACTTAGGAGGACGTATTCTGTAGAGCTGCTAGACGCAGAGGATTACAACTCAACCAAGTTTTTGAATGACATGAATCGAGACACCAGTTCAGACGGCTTTGACTCTTTGAACGAAGAAAATGCCCACAAGTAG 1497 0.4456 MDHDRRSPGAESLELEKGDSKEKKTNAKGRRARTGYSDSIRELDLNSLYIKEEGSAEWPASRDMPEDCRGSLECEALPSNASTSDSELADAANNAQWRGLLRFMKKGSHMRFAHPPKNIPKLTRRTVKRIKEDLIPGLHSSVPAPSLDPDFYCFKSSWINFSFTQLKAATKDFSDELLIGKGGYAEVYKGKMEDGTYVAIKRLTRGSQEEMTADFLSELGIIVHVDHPNIARLIGYGVEGGMFLVLQLSPHGSLAGILYGPRERLDWNVRFKVALGTAEGLQYLHEGCQRRIIHRDIKAANILLSEDFEPQVSDFGLAKWLPDQWTHHTVDKIEGTFGYLPPEFFMHGIVDEKTDVYAYGVLLLELITGRQALDSSQKSLVMWAKPLLSVDKIKELVDPCLRNAYDEEQMKIVVMTASLCIEQCSIERPHMSQVLKTLKRDEGGLKFVMERQKSKLRRTYSVELLDAEDYNSTKFLNDMNRDTSSDGFDSLNEENAHK 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0350 498 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 149 248 - -
Prci4g0350 498 SUPERFAMILY Protein kinase-like (PK-like) 153 438 IPR011009 -
Prci4g0350 498 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Prci4g0350 498 Gene3D Phosphorylase Kinase; domain 1 146 247 - -
Prci4g0350 498 Pfam Protein tyrosine and serine/threonine kinase 179 438 IPR001245 GO:0004672|GO:0006468
Prci4g0350 498 ProSitePatterns Protein kinases ATP-binding region signature. 179 201 IPR017441 GO:0005524
Prci4g0350 498 PANTHER OS08G0249100 PROTEIN 49 472 IPR046958 -
Prci4g0350 498 Gene3D Transferase(Phosphotransferase) domain 1 250 459 - -
Prci4g0350 498 MobiDBLite consensus disorder prediction 1 37 - -
Prci4g0350 498 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 250 453 - -
Prci4g0350 498 ProSiteProfiles Protein kinase domain profile. 173 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0350 498 SMART serkin_6 173 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0350 Prci-Chr4 2534768 2537948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0350 147 439 Receptor kinase-like Gene Family AT1G53420 41.196 8.57e-69 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Prci4g0350 PK_Tyr_Ser-Thr 2.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0350 - - lja:Lj6g3v1915960.1 659.448