Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0306 ATGCGTCGGTGGCTTTGTTGTTCTTGTTATGTTGAAGAGCCTTACCCTTCTGAAAATGAGCACCTTAAAAGCCCAAGGAATTATGGGGATGGTATCCCAAAAGGCTCAAAGGCTTCAGCTCCTGTTAAACCTGAAACACAAAAGGCTGCACCACCTATTGAAGTGCCAGCATTAGCTTTAGATGAACTAAAAGAAATGACTGACAACTTTGGATCAAAGGCATTGATTGGTGAAGGTTCTTATGGGAGAGTATATTATGCTACTTTAAACAGTGGAAAGGCTGTGGCTGTGAAGAAGCTTGATGTTTCATCGGAACCTGAATCCAATGTTGAGTTTTTGACCCAGATTTCGACGGTCTCAAGAATGAAGCATGAAAATTTTGTTGAGCTGCATGGTTATTGTGTTGAAGGAAATCTTCGTATACTTGCATATGAGTTTGCAACTATGGGATCTCTTCATGACATACTGCATGGTAGGAAGGGAGTTCAAGGGGCACAACCAGGGCCAACCCTTGACTGGATGCAACGAGTTAGAATTGCAGTTGATGCGGCAAGGGGGTTGGAATATCTACATGAGAAAGTTCAGTCGCCTATCATACACAGAGATATCCGATCAAGCAATGTACTAATTTTTGATGATTACAAAGCAAAGATAGCTGATTTTAATCTTTCAAATCAGGCCCCTGACATGGCTGCACGCCTTCATTCCACTCGAGTGTTGGGAACTTTTGGTTATCATGCTCCAGAGTATGCAATGACTGGCCAATTGACTCAAAAAAGTGATGTCTACAGTTTTGGTGTTGTTCTTCTTGAGCTTCTTACAGGGAGAAAACCTGTTGACCATACCATGCCTCGAGGACAGCAAAGTCTGGTTACATGGGCTACTCCAAGACTGAGTGAAGATAAAGTCAAACAATGCGTGGATCCAAAACTGAAGGGAGAATATCCTCCAAAAGGAGTTGCAAAGCTGGCTGCTGTTGCAGCACTGTGTGTGCAGTATGAAGCTGAGTTTAGGCCGAATATGAGCATCGTGGTTAAGGCGCTGCAGCCACTTCTGAAGGCTCCTCCCGCTCAAACACCGGAAACTTGA 1089 0.438 MRRWLCCSCYVEEPYPSENEHLKSPRNYGDGIPKGSKASAPVKPETQKAAPPIEVPALALDELKEMTDNFGSKALIGEGSYGRVYYATLNSGKAVAVKKLDVSSEPESNVEFLTQISTVSRMKHENFVELHGYCVEGNLRILAYEFATMGSLHDILHGRKGVQGAQPGPTLDWMQRVRIAVDAARGLEYLHEKVQSPIIHRDIRSSNVLIFDDYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKAPPAQTPET 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0306 362 SMART tyrkin_6 70 348 IPR020635 GO:0004713|GO:0006468
Prci4g0306 362 Gene3D Phosphorylase Kinase; domain 1 42 146 - -
Prci4g0306 362 FunFam PTI1-like tyrosine-protein kinase 3 148 357 - -
Prci4g0306 362 SUPERFAMILY Protein kinase-like (PK-like) 51 348 IPR011009 -
Prci4g0306 362 ProSitePatterns Tyrosine protein kinases specific active-site signature. 198 210 IPR008266 GO:0004672|GO:0006468
Prci4g0306 362 PIRSF ILK 29 359 - -
Prci4g0306 362 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Prci4g0306 362 MobiDBLite consensus disorder prediction 19 48 - -
Prci4g0306 362 FunFam PTI1-like tyrosine-protein kinase 3 33 146 - -
Prci4g0306 362 Pfam Protein tyrosine and serine/threonine kinase 75 348 IPR001245 GO:0004672|GO:0006468
Prci4g0306 362 ProSiteProfiles Protein kinase domain profile. 70 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0306 362 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 356 - -
Prci4g0306 362 Gene3D Transferase(Phosphotransferase) domain 1 148 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0306 Prci-Chr4 2197610 2202188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0306 5 360 Receptor kinase-like Gene Family AT4G02010 44.290 4.49e-91 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Prci4g0306 PK_Tyr_Ser-Thr 5.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0306 K13436 - gmx:100790016 660.988