Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0292 ATGGCTTCGTCCCTGAATGCTCCTCTCCTCTGTTTTCTGATTCTTTTTCTGCCTTCCGTTTGTGTTTTTGCCCAAACCAGAAATAGTAATCTCAGTGTGGGCGATTCTTTCATAGCAGGAAATGGCAACACCCCATGGGTGGTTTCGCCTTCCGGGGATTTTGCCTTTGGGTTTCAGCCACTTAAGAATAGTAACAGCCTCTTCTTGCTCTCGATCTGGTATGCCAACATTCCAAACACAACCATCGTTTGGTATGCCAATGGAGATAATCCTGCTCCAAGGGGGTCGAGAGTTCAGGTTACCGCTTCAGAAGGGCTTAAGCTCACTTCTCCTGATGGTCAGACTCTGTGGACGTCAGAAAATACCCCGTCTGGTCGTGTTGCTTCTGGTGCGTTGAATGACTTTGGCAACTTTGTTCTTCAGGATAGGAGCTCCACCTCTGTCTGGGAGACCTTCAAGGATCCTAAGGACACCATGTTGCCCTCCCAGACTTTGGGAAAGGGAGGAAAGCTTTCTTCTCGAAAGTTAGAGGCTGATTTCGCGCAGGGAAGGTTTCAACTTGTTCTTCAGGATGAGGGTAATCTAGTGATGCATTCTATAAACTTACCATCTGAGTATGCTAATGAAAATTATTTCGATAGTAAAACTGTTGAGTCCGATACATCAAGTCCTGGAACTCAACTGGTCTTCAACAAATCTGGAGACTTTTATGTTTCAAGGGAGAACAATGATACATACACCTTCTCTAACCAGAACATACCCTCCCAGTCTCAATTTTATCTTCGAGTTACTCTCAATTTTGACGGAGTTCTGACTTTCTATCAACATCCTAGGAGGTCCTATGGTAATGAAACTTGGACGCCTATCTGGTCTAAGCCAGATAATATCTGCAGTGCTACGATCAAAGAAGGAGCAGGCATTTGCGGATATAATAGCTTTTGCAGATTGGGTGAAAATAGCAGGCCAAATTGTCAGTGCCCGCCCGGTTATTCCCTTCTAGATCCTGAAGATCCATATGGTAGTTGTAAACCTGATTTCATACAGGGCTGTAAAGAAGATGAGCTTAGTCAGGGGAAAGATCTATATGACTTTAAGGAGTTGATAGATACTGATTGGCCTCTATCTGATTATGCGCTTCTAAAGCCTTTTACAGAAGAAAAGTGCAAACAGGCCTGTTTGGAAGATTGCTTTTGTGCGGTTGCCATTTTTAGATCAGGTGACAGCTGCTGGAAGAAGCGGTGGCCACTTTCTAATGGTCGAGTTGACACGAGTCTTAATTTTGGTAAGGCCTTGATCAAGGTGAGGAAAGACAATTCCTCACTAAGTGGTCCTCCTGGTCCTCCAATCATCAAACGAAAGAATCAGGACACTTTGATATTGGTGGTCTCTGTTCTCTTGGGTAGCTCTGCCATTCTTAATCTCGTATTAACTGGAGCATTCTGTCTGGGCTTTTCCTCCATTTACCAGTTGCGGAAGAAGCTCAAAAGTGTTTACCGAAGTGACAGTGCTGTTGAAACTAATCTGCGCTGTTTTACTTACAAGGAGCTTGAAGAGGCTACAAATGGATTCAAGGAAGAGCTAGGAAGAGGAGCTTTTGGTGTTGTTTATAAAGGAGCCATAGTCATGGGTCCTGCAGTGCCTGTGGCAGTCAAAAGGTTGAACACCTTTCTTTTGCAAGAAACTGAGAAGGAATTCAAGAATGAAGTTAATGTCATTGGTCAGACCCATCACAAGAATTTGGTTCGTTTGCTTGGGTTCTGTGAGGAGGGAAATGAAAGGCTGCTGGTGTACGAGTGCATGAGCAATGGCACATTAGCAAGCCTTCTTTTCAGGGACTCTAGACCCAATTGGAACCTACGCCTAAAAATGGCATTTGGGATTGCAAGAGGACTTGTTTATTTGCATGAAGATTGCGGCACCCAGATCATCCACTGTGACATAAAGCCTCAAAACATTCTCCTTGACGACTACTTTAATGCTCGTATCTCTGACTTTGGACTGTCCAAGCTCCTAAACATGAATCAGAGCCGAACCCATACAGCTATAAGGGGAACAAAAGGGTATGTTGCACTTGAATGGTTCAAGAACATGCCTATCACGGCTAAAGTAGATGTCTATAGTTTTGGTGTATTGCTGCTGGAGATTGTCTGTTGCAGAAGAAACGTGGACATGGAACCAGAGAATGAGGAGAGAGCAATCTTAACAGATTGGGCTTACGACTGCTACACAACAGGTTCTCTAGAAGCTTTGGTTGAGCAAGATCACGAGGCACTGAATGACAAGGAGAACCTGGAGAGGTTAGTAATGGTTGCCATTTGGTGTACCCAAGAAGACCCAACTGTAAGACCCACCATGAGAAAAGTTTCTCAGATGCTTGAAGGAGTTGCTGAAGTGCCTGCTCCACCATGCCAGATCGTAAATAGTGTGACTCGAGATCACTATTACTCACCCACTTTGGAGCATGATTGA 2469 0.4439 MASSLNAPLLCFLILFLPSVCVFAQTRNSNLSVGDSFIAGNGNTPWVVSPSGDFAFGFQPLKNSNSLFLLSIWYANIPNTTIVWYANGDNPAPRGSRVQVTASEGLKLTSPDGQTLWTSENTPSGRVASGALNDFGNFVLQDRSSTSVWETFKDPKDTMLPSQTLGKGGKLSSRKLEADFAQGRFQLVLQDEGNLVMHSINLPSEYANENYFDSKTVESDTSSPGTQLVFNKSGDFYVSRENNDTYTFSNQNIPSQSQFYLRVTLNFDGVLTFYQHPRRSYGNETWTPIWSKPDNICSATIKEGAGICGYNSFCRLGENSRPNCQCPPGYSLLDPEDPYGSCKPDFIQGCKEDELSQGKDLYDFKELIDTDWPLSDYALLKPFTEEKCKQACLEDCFCAVAIFRSGDSCWKKRWPLSNGRVDTSLNFGKALIKVRKDNSSLSGPPGPPIIKRKNQDTLILVVSVLLGSSAILNLVLTGAFCLGFSSIYQLRKKLKSVYRSDSAVETNLRCFTYKELEEATNGFKEELGRGAFGVVYKGAIVMGPAVPVAVKRLNTFLLQETEKEFKNEVNVIGQTHHKNLVRLLGFCEEGNERLLVYECMSNGTLASLLFRDSRPNWNLRLKMAFGIARGLVYLHEDCGTQIIHCDIKPQNILLDDYFNARISDFGLSKLLNMNQSRTHTAIRGTKGYVALEWFKNMPITAKVDVYSFGVLLLEIVCCRRNVDMEPENEERAILTDWAYDCYTTGSLEALVEQDHEALNDKENLERLVMVAIWCTQEDPTVRPTMRKVSQMLEGVAEVPAPPCQIVNSVTRDHYYSPTLEHD 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0292 822 CDD B_lectin 40 155 IPR001480 -
Prci4g0292 822 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Prci4g0292 822 Gene3D - 154 282 IPR036426 -
Prci4g0292 822 Coils Coil 747 767 - -
Prci4g0292 822 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 37 803 - -
Prci4g0292 822 PIRSF SRK 1 820 IPR024171 GO:0004674
Prci4g0292 822 ProSitePatterns Protein kinases ATP-binding region signature. 527 551 IPR017441 GO:0005524
Prci4g0292 822 SMART serkin_6 521 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0292 822 FunFam S-receptor-like serine/threonine-protein kinase 491 599 - -
Prci4g0292 822 SUPERFAMILY Protein kinase-like (PK-like) 503 793 IPR011009 -
Prci4g0292 822 Pfam S-locus glycoprotein domain 235 331 IPR000858 GO:0048544
Prci4g0292 822 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 203 IPR036426 -
Prci4g0292 822 Gene3D Transferase(Phosphotransferase) domain 1 600 798 - -
Prci4g0292 822 ProSiteProfiles EGF-like domain profile. 293 336 IPR000742 -
Prci4g0292 822 SMART blect_4 36 155 IPR001480 -
Prci4g0292 822 Pfam Protein tyrosine and serine/threonine kinase 523 792 IPR001245 GO:0004672|GO:0006468
Prci4g0292 822 CDD STKc_IRAK 527 794 - -
Prci4g0292 822 Pfam D-mannose binding lectin 81 167 IPR001480 -
Prci4g0292 822 Gene3D Phosphorylase Kinase; domain 1 485 598 - -
Prci4g0292 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 600 800 - -
Prci4g0292 822 ProSiteProfiles Protein kinase domain profile. 521 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0292 822 Gene3D - 23 153 IPR036426 -
Prci4g0292 822 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 25 153 - -
Prci4g0292 822 ProSiteProfiles Bulb-type lectin domain profile. 22 153 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0292 Prci-Chr4 2084134 2087294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0292 507 820 Receptor kinase-like Gene Family AT1G60800 41.194 5.73e-72 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci4g0292 PK_Tyr_Ser-Thr 8.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0292 - - gmx:106798064 1042.34