Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0265 ATGGATGACAAGTTTCCGAAGATGGAAATCTCCAAGCAAAGGGAATTTCCAACTTGCTTTAAAGAAACGGCTATGGGATCAAAGATTTTAGGGCATCCAATCATTAGAGGGTCTCAGACTCTCACTGCTTCTCATCAAATTCTTGTGCCAAGGGGGATGGATTCAATTTCATCAATAGCATCATCTGAAAAGCTTCTTTCAATTTCAGATTCAATGTCGTCAACAGAAGAGCTAACCGGGGCAAGTTTCACTAGTTTTCTCCCTCGAAGGGCCGCTGATCAAGAGGAAATCACCGAAGTTCAACAGAATTCTGAATTCAATCCCATCTGTACTCCAAATGCTTCAACCTCAGGAACCGGAGAAAGTTTCATTCCTCTAAATCTATTGGAAACACTGCCAGCATTACCAAGAGCAGGCGCATCTGATGAGACAGCTTCTCCAGCTTCTTCCAATGCTACATCTAGATTTCCATATGTGACATTGTTTCGGCAGGAGAACTCCATGTTATTTTCATCATCTTCAGAGGTCACTGAGCCACTAGACAGGCTCAAAAATTGTGAATCTCAGCCAACAATTTCAGACACTTCATTTTCTGTGCCCCAGTGTCATGCAATCCAGAATCAAGCAGGTACGGATCCACTGAAAATGAATCAGAATCTTAAAAACTTCCGATCCAGGTCTTTTAATGACTATTGCATGAGCACCACCAAGACTCAGCCTATGAAGTATGCTGGACGTGGGAAGCTGTTTAAAGGGGTGAGGCAAAGACACTGGGGAAAATGGGTTGCAGAGATTAGGTTACCAAGGAACCGAACGAGGGTTTGGCTAGGGACATTTGACACGGCCGAAGATGCAGCCATGGCTTATGACACAGCTGCATACATACTTCGTGGAGAATATGCTCAACTGAACTTTCCACATCTAAAGCATCATATTAAGGCCAATTCTTTGAATGGAACAACAGCTGCCCTACTGGAGGCAAAGCTTCAAGCCATATCACAAGGAATTTCTTCTCAAAGAGTGGCCCCTGATCCCCTGCCAGGATCATTGGATAAGAGCCTAGTTGAGAATGCCAAATTCAACGGTAAAAATAAAAATCAGAATCCACCTAAAAATGAATGGCAGTTTGAGATAGAGACCAAGGTTGGAGATGGTACAATCGAGAGAAGCAAAAATAATCATCAAGAGATATCTGACATGGAGGCTATTCAGTTAAGTAGAATGCCCTCCTTAGACATGGACATCATTTGGGATTCCCTTTTAGTCTCCGATTCATGA 1278 0.4296 MDDKFPKMEISKQREFPTCFKETAMGSKILGHPIIRGSQTLTASHQILVPRGMDSISSIASSEKLLSISDSMSSTEELTGASFTSFLPRRAADQEEITEVQQNSEFNPICTPNASTSGTGESFIPLNLLETLPALPRAGASDETASPASSNATSRFPYVTLFRQENSMLFSSSSEVTEPLDRLKNCESQPTISDTSFSVPQCHAIQNQAGTDPLKMNQNLKNFRSRSFNDYCMSTTKTQPMKYAGRGKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAMAYDTAAYILRGEYAQLNFPHLKHHIKANSLNGTTAALLEAKLQAISQGISSQRVAPDPLPGSLDKSLVENAKFNGKNKNQNPPKNEWQFEIETKVGDGTIERSKNNHQEISDMEAIQLSRMPSLDMDIIWDSLLVSDS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0265 425 CDD AP2 248 308 IPR001471 GO:0003700|GO:0006355
Prci4g0265 425 ProSiteProfiles AP2/ERF domain profile. 249 306 IPR001471 GO:0003700|GO:0006355
Prci4g0265 425 SMART rav1_2 249 312 IPR001471 GO:0003700|GO:0006355
Prci4g0265 425 FunFam Ethylene-responsive transcription factor 2 248 307 - -
Prci4g0265 425 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 106 420 - -
Prci4g0265 425 Gene3D AP2/ERF domain 249 307 IPR036955 GO:0003700|GO:0006355
Prci4g0265 425 PRINTS Ethylene responsive element binding protein signature 250 261 IPR001471 GO:0003700|GO:0006355
Prci4g0265 425 PRINTS Ethylene responsive element binding protein signature 272 288 IPR001471 GO:0003700|GO:0006355
Prci4g0265 425 Pfam AP2 domain 250 298 IPR001471 GO:0003700|GO:0006355
Prci4g0265 425 SUPERFAMILY DNA-binding domain 249 307 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0265 Prci-Chr4 1904416 1905996 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0265 124 420 AP2-EREBP Transcription Factor Family AT4G13620 40.656 1.50e-64 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci4g0265 AP2 4.3e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0265 - - pcin:129309727 820.846