Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0254 ATGCAGCTGAAACACCTTTGTGTCATTTTACCTGCAGATTCTGCAGAGTTTAAGCATCACCCACCATCAAAAGTCAACCAATCTTCCCAGGGAGAAACCAAGGTGAAGAAACATCACAGGGCTTGTGGGGGTCAAGTTCTTGCCTTCTTTCGTTATTCTCTAAGCAAATTATATGGCACAAACTGTTCGAGGTTTTTCCACAATGAAGTGGGGAAAGGGAAACAGGGCTCGGTCGTGCTGTTTCATGACATGGATGGAGTACAACTCTCTGCCAAGATTGGTGGGGACAGCCCAAGAATCTTCGGCTTTGCTGAGCTTTTCATAGGGTCTAATGGTTTCAGTGAGGATCATGTTCTGGGAAGTGGAGGTTTTGGCAAAGTGTACAAGGCTGTTTTGCCCAGTGATGGAACAGAAGTTGCTGTGAAATGTTGCTTAGCAGAGAAAGGACAGCAATTTGAGAAGACTTTTGCTGCTGAGTTAGCAGCTGTGGCCCATCTTCGACACAAGAACCTTGTCAGGCTCAGGGGTTGGTGTGTTCATGAAGATCAGTTGTACCTTGTCTATGATTACATGCCTAACCTCAGCCTTGACCGCGTACTCTTTCGCCGGCCTGAGAATCCAGATGCTGAGCCTCTTGGTTGGGGAAGGCGCGCGAAAATTATTAAAGGCTTGGCAGCTGCATTATACTATCTTCATGAGCAGCTAGAGACTCAGATCATTCATAGGGATGTGAAAACCAGCAATGTGATGCTTGACTCCCAATATAATGCTCGGTTGGGTGACTTTGGCTTGGCAAGGTGGCTAGAACATGAGCTTGAGTATCATCAAAGTAGGAAAACATCAACCAAAATCGACCCTTTCAGGTTGGCAGAGACAACAAGAATTGGTGGCACAATTGGGTACTTGCCCCCTGAGAGTTTCCAGAAAAAAAGCATCGCCACTTCAAAATCTGATGTGTTCAGCTTTGGCATAGTTGTGCTGGAAGTGGCATCTGGAAGGAGAGCTATTGACCTTGCGTACCCTGATGATAAGATCATTTTGCTTGACTTCGTCAGAAGGCTTTCTGATGAGAGAAAGCTCCTAGCAGCAGGGGATACTCGGCTTCCAGATGGTTCTTACAAGCTTTCTGAGATGGAACATTTGCTTCACATAGGCCTTCTTTGTACACTCCATGAACCACAATCAAGGCCTAGCATGAAGTGGATTGTAGAAGCACTTTCTGACGTTTCAAGGCCATTGCCAGCTCTTCCTTCTTTCCATTCCCACCCTCTATATATTACTCTATCATCTCCATCTGATACAAGCCTTAGCAGCACAAATGGCTCTAGCACTGTCACTGACAATGTCAGCACAATCACCAACTATTCTTCATCCAACTATGTCACGGCAAATGGGAGAACAATATACATGACTGCAGAAGATAGAAACAGTGGAATCTCCTCTGCAAAGAGCATGTATCGCCACACATCATTTCCTGTGGTTGAAGCTCCAAGGGAAATATCATACAAGGAGCTTGTCTTGGCTACAGATCATTTTTCAGAGTCAAGGAAGGTAGCTGAGCTAGACTTTGGAACTGCCTACCATGGCATCCTTGAGGATCGTTACCATGTCATGGTGAAACGCCTTGGAATGAAGACTTGCCCAGCACTGCGTGAAAGATTCTCTAATGAACTGCGAAATCTAGCAAGACTTCGCCACCGGAATCTGGTTCAGCTTCGAGGATGGTGTACTGAGCAAGGGGAAATGCTTGTTGTGTATGATTACTCCGCAGCAAGACTTCTCAGTCACCATCTTCTGCATCATTATAATCATAGAGATGGGTGTTCTGTCCTGCACTGGCATCATAGATACAATATAATAAAATCTCTAGCTTCTGGCATTCTTTATCTTCATGAGGAATGGGAAGAACATGTAATTCATAGGAACATCACTTCTTCAGCTGTGGTCCTTGAGCCGGATATGAACCCAAGACTCAGCAGTTTTGCCCTGGCTGAATTTTTGACCCGGAATGAGCATGGCCATCATGTAATCAAAGACACCAGCAAATCAGTTCGAGGGATTTTTGGCTACATGTCACCGGAATATATGGAATCCGGTGAAGCTACCTCTGCAGCTGATGTCTACAGTTTTGGTGTGGTGATACTTGAAGTTATCAGTGGACAGATGGCAGTGGACTTTAGGCAGCCCGAGGTGCTATTGGTGAAGAAGGTTCATGAATTTGAGACGAGAAAAAGACCACTGCAGGATTTAGCAGACATGAGGCTCAATGGAGAGTACAATTACAAAGAACTGATGAGATTGGTGAAGCTAGGAATTGCATGCACCCGGTCTGACCCGCAGTTAAGACCAAGCATGAGACAAATAGTAAGCATCCTCGATGGAAATGACAGATTGATCGTGGAAAAAAACCAGAAAGAGAGCACGGAAGAATGGAAACAAAGGAATGCTTATTCTTTGTCCTTGATCAGGAGAATCCAGGCTCTCGGAATACGTTGA 2496 0.4519 MQLKHLCVILPADSAEFKHHPPSKVNQSSQGETKVKKHHRACGGQVLAFFRYSLSKLYGTNCSRFFHNEVGKGKQGSVVLFHDMDGVQLSAKIGGDSPRIFGFAELFIGSNGFSEDHVLGSGGFGKVYKAVLPSDGTEVAVKCCLAEKGQQFEKTFAAELAAVAHLRHKNLVRLRGWCVHEDQLYLVYDYMPNLSLDRVLFRRPENPDAEPLGWGRRAKIIKGLAAALYYLHEQLETQIIHRDVKTSNVMLDSQYNARLGDFGLARWLEHELEYHQSRKTSTKIDPFRLAETTRIGGTIGYLPPESFQKKSIATSKSDVFSFGIVVLEVASGRRAIDLAYPDDKIILLDFVRRLSDERKLLAAGDTRLPDGSYKLSEMEHLLHIGLLCTLHEPQSRPSMKWIVEALSDVSRPLPALPSFHSHPLYITLSSPSDTSLSSTNGSSTVTDNVSTITNYSSSNYVTANGRTIYMTAEDRNSGISSAKSMYRHTSFPVVEAPREISYKELVLATDHFSESRKVAELDFGTAYHGILEDRYHVMVKRLGMKTCPALRERFSNELRNLARLRHRNLVQLRGWCTEQGEMLVVYDYSAARLLSHHLLHHYNHRDGCSVLHWHHRYNIIKSLASGILYLHEEWEEHVIHRNITSSAVVLEPDMNPRLSSFALAEFLTRNEHGHHVIKDTSKSVRGIFGYMSPEYMESGEATSAADVYSFGVVILEVISGQMAVDFRQPEVLLVKKVHEFETRKRPLQDLADMRLNGEYNYKELMRLVKLGIACTRSDPQLRPSMRQIVSILDGNDRLIVEKNQKESTEEWKQRNAYSLSLIRRIQALGIR 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0254 831 SUPERFAMILY Protein kinase-like (PK-like) 98 442 IPR011009 -
Prci4g0254 831 Gene3D Transferase(Phosphotransferase) domain 1 191 411 - -
Prci4g0254 831 PANTHER - 88 408 - -
Prci4g0254 831 SUPERFAMILY Protein kinase-like (PK-like) 490 792 IPR011009 -
Prci4g0254 831 ProSiteProfiles Protein kinase domain profile. 512 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0254 831 Gene3D Transferase(Phosphotransferase) domain 1 594 818 - -
Prci4g0254 831 ProSiteProfiles Protein kinase domain profile. 113 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0254 831 FunFam Receptor like protein kinase S.2 87 190 - -
Prci4g0254 831 Pfam Protein tyrosine and serine/threonine kinase 516 792 IPR001245 GO:0004672|GO:0006468
Prci4g0254 831 SMART serkin_6 113 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0254 831 SMART serkin_6 512 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0254 831 Gene3D Phosphorylase Kinase; domain 1 86 190 - -
Prci4g0254 831 FunFam Receptor like protein kinase S.2 590 816 - -
Prci4g0254 831 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Prci4g0254 831 Gene3D Phosphorylase Kinase; domain 1 474 588 - -
Prci4g0254 831 ProSitePatterns Serine/Threonine protein kinases active-site signature. 239 251 IPR008271 GO:0004672|GO:0006468
Prci4g0254 831 FunFam Receptor like protein kinase S.2 191 411 - -
Prci4g0254 831 Pfam Protein kinase domain 114 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0254 Prci-Chr4 1844374 1847289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0254 502 795 Receptor kinase-like Gene Family AT3G53810 38.796 1.14e-53 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci4g0254 Pkinase 1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0254 - - gmx:100796108 1198.34