Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0237 ATGAGAGCCATAAGGAACTTTTTGGGGTTCAATTGGAGTCATTCTATCTATTCTACTTCTGCCCATAGAAACATCAATAGCAGGGAAGCTCTCTCTTTTGTTAGAAATACCATGTCTCGGTCAGATGAATCGCCTGCTTTTAGCAAACCCAGATCGGTACTCAAGGTGGTGTTTGCCAGAAATGTGAATGGAGGAAGTCGTCTAATGGTTAACAGGAATATTGCAAGTGAGTTCAAGGGTTTGGATCCTTTTCTGAATCTGGATCACTTTTCAGTGACTCACCCTGGAGGATTCACTGATCATCCGCATAGAGGGTTTGAGACAGTCACCTATATGCTAGAGGGAGCGATAGTTCATCAAGATTTCGCTGGAAATAAAGGAACAATAAGAGCTGGTGATGTCCAATGGATGTCTGCAGGCAGAGGGATCATTCACTCTGAGATGCCTGCAGGAGTGGGTACTCATACAGGAGTGCAGCTATGGATCAATCTTCCCAAGAAGGACAAAATGATTGAACCAAAGTATCAAGATCTGCTAAGCGAGAACATTCCAAAAGCAGAGAAAGATGGGTTTGAAGTAAAAGTGATAGCAGGCGAAGCACTAGGGGTTCAATCAGCGGTACACACAAGAACTCCAGCCATGTTTCTTGATTTCAAGGTCAGCCCTCAAGCCCAGGTGCACCAGAACATTCCAGAGTCTTGGAATTCCTTCGCGTACGTGCTTGACGGAGAAGGAGTGTTTGGATCTCCGAGCTCATCACCGATTGGTCAGCACAATGTGGTGTTCTTGGGGCCTGGAGATGGTGTGAGTGTGTGGAACAAGTCTTCTGAGGCTCTGAGGTTTCTGCTCATAGCTGGGGAACCACTAAAGGAGCCAGTGGCTCAGCATGGCCCTTTTGTGATGAACACTCATTCTGAGATTGAGAAGGCCATGGAGGACTTCCATTATTGCAGGAATGGTTTGAGAATGGCAAGCATTGGAGGTCTCAGTGATGCGTGGACGCGAGTATGA 1011 0.4649 MRAIRNFLGFNWSHSIYSTSAHRNINSREALSFVRNTMSRSDESPAFSKPRSVLKVVFARNVNGGSRLMVNRNIASEFKGLDPFLNLDHFSVTHPGGFTDHPHRGFETVTYMLEGAIVHQDFAGNKGTIRAGDVQWMSAGRGIIHSEMPAGVGTHTGVQLWINLPKKDKMIEPKYQDLLSENIPKAEKDGFEVKVIAGEALGVQSAVHTRTPAMFLDFKVSPQAQVHQNIPESWNSFAYVLDGEGVFGSPSSSPIGQHNVVFLGPGDGVSVWNKSSEALRFLLIAGEPLKEPVAQHGPFVMNTHSEIEKAMEDFHYCRNGLRMASIGGLSDAWTRV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0237 336 CDD cupin_pirin_C 212 288 - -
Prci4g0237 336 PANTHER PIRIN-RELATED 38 325 IPR012093 -
Prci4g0237 336 Pfam Pirin C-terminal cupin domain 215 320 IPR008778 -
Prci4g0237 336 SUPERFAMILY RmlC-like cupins 74 322 IPR011051 -
Prci4g0237 336 Pfam Pirin 75 162 IPR003829 -
Prci4g0237 336 PIRSF Pirin 49 325 IPR012093 -
Prci4g0237 336 Gene3D Jelly Rolls 70 315 IPR014710 -
Prci4g0237 336 Gene3D Jelly Rolls 184 289 IPR014710 -
Prci4g0237 336 CDD cupin_pirin_N 77 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0237 Prci-Chr4 1694671 1696955 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0237 48 324 Calmodulin-binding Proteins AT3G59220 58.214 8.67e-113 327