Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0236 ATGAGAACCATCAGCCACAGCTTTTCACTGTTCAATTGGCCGCCGCATTCTTTTTCGTCCCGTGCCGCCTCTGCACTTTCATCCAAACTCTCCGCCTTCATGTCACACTCAGATCAACCTTCCGTTTTCGAAACGCCCAGGCTGGTTCTCAAGAAGGTTCTGGCCAAATCTCAACATGAAGGCGACGGTGCTGTTGTTAGAAGAGGCATCGGAAGGAGCGAGTTGAAGAGTTTGGATCCCTTTCTGATGATGGATCACTTCTCTGTGTCTCCACCGGGAGGCTTCCCCGACCATCCACACAGAGGTTTTGAAACTGTCACATACATGCTGCAGGGAGCCATAACTCATCAAGATTTTGCTGGGCACAAGGGTACAATTAGAACCGGTGATGTTCAGTGGATGACCGCAGGCCGAGGAATAATTCACTCTGAAATGCCCGGAGGAGAAGGAACCCACAAGGGATTGCAGCTATGGATCAATTTATCTTCCAAGGATAAGATGATTGAACCAAATTATCAAGAACTTCCAAAAGAGGACATACCAGAGGCAGGACAACATGGGGTTGAAGTGAGGGTTATAGCAGGAGAAGCAATGGGAGTTCATTCACCTGTTTACACCAGAACCCCAACCATGTTCCTCGATTTCTCTCTCAGCCCAGGAGCTGAACGGCATCAGAACATTCCAGAATCATGGAACGCCTTTGTTTATGTGATTGAAGGGGAAGGGGTTTTTGGGTCTGTGAGTTCTTCACCAGTGGCAGCTCACTATGTGCTGGTCTTGAGCCTTGGAGATGGTCTGAGTGTGTGGAACAGATCTTCAAAGCCTCTGAGGTTTGTGTTGATTGCTGGCCAGCCACTAAATGAACCGGTGGTTCAGTATGGACCCTTTGTGATGAACACGCAGTCTGAGATTGAAAAAACCATAGAGGACTATCAATATTGTAAGAACGGGTTTGAGATGGGAAGATATTGGAGATCTCAACAGTAA 987 0.4772 MRTISHSFSLFNWPPHSFSSRAASALSSKLSAFMSHSDQPSVFETPRLVLKKVLAKSQHEGDGAVVRRGIGRSELKSLDPFLMMDHFSVSPPGGFPDHPHRGFETVTYMLQGAITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPGGEGTHKGLQLWINLSSKDKMIEPNYQELPKEDIPEAGQHGVEVRVIAGEAMGVHSPVYTRTPTMFLDFSLSPGAERHQNIPESWNAFVYVIEGEGVFGSVSSSPVAAHYVLVLSLGDGLSVWNRSSKPLRFVLIAGQPLNEPVVQYGPFVMNTQSEIEKTIEDYQYCKNGFEMGRYWRSQQ 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0236 328 Gene3D Jelly Rolls 60 312 IPR014710 -
Prci4g0236 328 FunFam pirin 60 197 - -
Prci4g0236 328 Pfam Pirin C-terminal cupin domain 212 317 IPR008778 -
Prci4g0236 328 CDD cupin_pirin_N 64 161 - -
Prci4g0236 328 PANTHER PIRIN-RELATED 34 327 IPR012093 -
Prci4g0236 328 CDD cupin_pirin_C 209 285 - -
Prci4g0236 328 Gene3D Jelly Rolls 181 286 IPR014710 -
Prci4g0236 328 PIRSF Pirin 45 325 IPR012093 -
Prci4g0236 328 Pfam Pirin 67 159 IPR003829 -
Prci4g0236 328 SUPERFAMILY RmlC-like cupins 47 325 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0236 Prci-Chr4 1691073 1693322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0236 45 322 Calmodulin-binding Proteins AT3G59220 64.643 3.36e-133 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0236 K06911 - gmx:100775597 499.975