Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0232 ATGGTGAACCTCATGGAATGGCAGAAGCAACAGCAGCCGACTGCAAATGCCAACAACGGAAACGGAGGAATGATGTACGTCAAGGTGATGACCGATGACCAATTGGAAACTCTCAGGCAGCAAATCGCCGTCTATACCTCCATTTGTGAGCAGCTCGTTGAGATGCACAAGACTCTCACTGCTCAACAGGATCTTGCAGGAGTTAGGCTGGGAAATATATACTGTGACCCGTTGATGACTTCTGCTGGACACAAAATAACTTCCAGACAGAGGTGGACTCCAACGCCTGTGCAGCTTCAAATTCTTGAGCGTATATTTGATCAGGGGAATGGAACTCCAAGCAAGCAAAAAATCAAAGAGATAACTGCTGAACTGAGCCAGCATGGCCAGATTTCTGAAACAAATGTCTATAATTGGTTCCAGAATAGGCGTGCCCGGTCAAAAAGAAAGCAGCAAAATGTGGCACCTAATAACACTGAATCTGAAGTAGAGACTGAAGCTGAATCTTCCAAAGATAAGAAAACAAAACCCGAGGAGTTTCAGTCTCAGCTTAGTGCATCAACCAGGGCTGAAGATTTGTGCTTCCAGAATCATGAAGTGTGTTCCGACTTGCACTATTTGAATCCAGAGTCCTGTAAACCAGAATCCATGTTCCCATCAGATGGCAGTCTGAAAAATACAAGAAGTTTCGGCCAAATGTCTGTTTTTGATGGAATGCTGTCAAACTCGAGGGATGTCTATATCGCTGGAAAAATGCAAGTGCCAGGAAGCTACAATTTATACCAGCAAGCTGGAGACTACAACATGACGGGCTGA 816 0.4485 MVNLMEWQKQQQPTANANNGNGGMMYVKVMTDDQLETLRQQIAVYTSICEQLVEMHKTLTAQQDLAGVRLGNIYCDPLMTSAGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKQKIKEITAELSQHGQISETNVYNWFQNRRARSKRKQQNVAPNNTESEVETEAESSKDKKTKPEEFQSQLSASTRAEDLCFQNHEVCSDLHYLNPESCKPESMFPSDGSLKNTRSFGQMSVFDGMLSNSRDVYIAGKMQVPGSYNLYQQAGDYNMTG 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0232 271 PANTHER WUSCHEL-RELATED HOMEOBOX 13 5 269 IPR044559 GO:0003700
Prci4g0232 271 Pfam Homeodomain 89 149 IPR001356 GO:0003677
Prci4g0232 271 SUPERFAMILY Homeodomain-like 87 152 IPR009057 -
Prci4g0232 271 Gene3D - 91 155 - -
Prci4g0232 271 ProSiteProfiles 'Homeobox' domain profile. 85 150 IPR001356 GO:0003677
Prci4g0232 271 MobiDBLite consensus disorder prediction 164 179 - -
Prci4g0232 271 CDD homeodomain 89 151 IPR001356 GO:0003677
Prci4g0232 271 MobiDBLite consensus disorder prediction 147 183 - -
Prci4g0232 271 SMART HOX_1 87 154 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0232 Prci-Chr4 1647245 1650655 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0232 4 271 Wox Gene Family AT4G35550 50.336 3.06e-94 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Prci4g0232 Homeodomain 1.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0232 - - qsu:112005537 409.068