Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0221 ATGACACAGGCTCTAAACACTGCTTTGCTGCTGAAAGAAAAGGAAGAGGAGCCGGTTACCGCAAGCCGGTTAGAGGCTGCCGATTCAGTTGTGGACGTTAGGGGCTCAGACTGTTTGGTCGGTCTAGAATGCTTTCTTAACATTGTCAGGGCACTGGGAATGGGATCATGCCTCTCTGCGCCCCATCCCCTCCCTTATTCGCCGGAATCCACTTCAGACAGTGCGAAGCGAAGGAGGAGATTAAGGAGAAGCTCTTCGCTTGATTCTAGAACGGAATTGGGCCTACATAAAATCCCTGGGAGAATGTTCGTAAATGGATCCAGCGAGGTTGCGTCCCTGTTTTGTAAGCAAGGCAAAAAAGGGATTAACCAGGATGCCATGCTTGTTTGGGAGAACTTCTGTTTAAAGGACACCATTTTTTGTGGAGTTTTCGATGGTCATGGTCCTAGTGGTCATAGGGTAGCAAAGAGAGTCAGGGATTCTTTCCCTTTAAAGCTTATTGCCCAATGGGAATTGCATCATAACAATAATGATGGACTAAGTGATGTCGGAAATGCTATGGAAAACCATAAGTCAGAGGAGATTGGATTTAGGATGGTTGATGGGAAACCTAGTCTTACTGATCATGAGCACAGCTGTACTAATACTTTGAAGGCGCTGAAGGAATCTTTTCTGAAGGCTTGCAAGGTTATGGACAAGGAACTGAAACTGCATCCTGGTATTGATTGCTTTTGCAGTGGGACAACAGCAGTCACCTTGGTCAAACAGGGGCAAGATCTTGTCATTGGAAATGTCGGGGACTCGAGAGCTATATTGGGTACTAGGGATCATGATAATTCTCTAATTGCTGTTCAGTTGACCATTGACCTGAAGCCAAATCTTCCAAGGGAAGCAGAGAGAATCAAGCGTTGCAGAGGAAGGGTATTTGCTCTTCGTAATGAACCTGAGGTTGCTCGAGTTTGGTTGCCCAATGCTGACTCTCCTGGCCTTGCGATGGCACGGGCTTTTGGAGATTTTATTCTGAAAGACTTTGGTCTGATATCTGTTCCTGATGTCTCCCATCACCGCCTTACTGAGAAGGATGAATTTGTTGTATTAGCCACGGATGGGATTTGGGATGTTTTGTCGAACCAAGAAGTTGTAGACATTGTGGCATCTGTGTCACGCTCTTCTGCAGCTCGAACACTTGTTGAGACAGCTGTTCGAACATGGAGGACAAAGTACCCTACTCCCAAAGTTGATGATTGTGCTGTAGTGTGTCTCTTTTTTGATTCAGATTCAGACTCAAAGTCAGTTTACACCACAGACAAGGAGATGCCCGAGGCGTCAGTCAACCTTCAATCTGAGGGACCTGCTCCTGAAAATGGAGTTTAA 1374 0.4607 MTQALNTALLLKEKEEEPVTASRLEAADSVVDVRGSDCLVGLECFLNIVRALGMGSCLSAPHPLPYSPESTSDSAKRRRRLRRSSSLDSRTELGLHKIPGRMFVNGSSEVASLFCKQGKKGINQDAMLVWENFCLKDTIFCGVFDGHGPSGHRVAKRVRDSFPLKLIAQWELHHNNNDGLSDVGNAMENHKSEEIGFRMVDGKPSLTDHEHSCTNTLKALKESFLKACKVMDKELKLHPGIDCFCSGTTAVTLVKQGQDLVIGNVGDSRAILGTRDHDNSLIAVQLTIDLKPNLPREAERIKRCRGRVFALRNEPEVARVWLPNADSPGLAMARAFGDFILKDFGLISVPDVSHHRLTEKDEFVVLATDGIWDVLSNQEVVDIVASVSRSSAARTLVETAVRTWRTKYPTPKVDDCAVVCLFFDSDSDSKSVYTTDKEMPEASVNLQSEGPAPENGV 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0221 457 ProSiteProfiles PPM-type phosphatase domain profile. 110 423 IPR001932 -
Prci4g0221 457 CDD PP2Cc 110 423 IPR001932 -
Prci4g0221 457 MobiDBLite consensus disorder prediction 63 88 - -
Prci4g0221 457 Gene3D - 105 425 IPR036457 -
Prci4g0221 457 MobiDBLite consensus disorder prediction 436 457 - -
Prci4g0221 457 PANTHER PROTEIN PHOSPHATASE 85 421 IPR015655 GO:0004722|GO:0006470
Prci4g0221 457 Pfam Protein phosphatase 2C 203 406 IPR001932 -
Prci4g0221 457 SUPERFAMILY PP2C-like 110 424 IPR036457 -
Prci4g0221 457 SMART PP2C_4 104 421 IPR001932 -
Prci4g0221 457 MobiDBLite consensus disorder prediction 429 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0221 Prci-Chr4 1501220 1505557 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0221 54 434 PP2C-type Phosphatase Gene Family AT3G02750 56.948 8.31e-154 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0221 - - gmx:100802479 602.438