Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0220 ATGACACAGGCTCTAAACACTGCTTTGCTGCTGAAAGAAAAGGAAGAGGAGCCGGTTACCGCAAGCCGGTTAGAGGCTGCCGATTCAGTTGTGGACGTTAGGGGCTCAGACTGTTTGGTCGGTCTAGAATGCTTTCTTAACATTGTCAGGGCACTGGGAATGGGATCATGCCTCTCTGCGCCCCATCCCCTCCCTTATTCGCCGGAATCCACTTCAGACAGTGCGAAGCGAAGGAGGAGATTAAGGAGAAGCTCTTCGCTTGATTCTAGAACGGAATTGGGCCTACATAAAATCCCTGGGAGAATGTTCGTAAATGGATCCAGCGAGGTTGCGTCCCTGTTTTGTAAGCAAGGCAAAAAAGGGATTAACCAGGATGCCATGCTTGTTTGGGAGGCTTGCAAGGTTATGGACAAGGAACTGAAACTGCATCCTGGTATTGATTGCTTTTGCAGTGGGACAACAGCAGTCACCTTGGTCAAACAGGGGCAAGATCTTGTCATTGGAAATGTCGGGGACTCGAGAGCTATATTGGGTACTAGGGATCATGATAATTCTCTAATTGCTGTTCAGTTGACCATTGACCTGAAGCCAAATCTTCCAAGGGAAGCAGAGAGAATCAAGCGTTGCAGAGGAAGGGTATTTGCTCTTCGTAATGAACCTGAGGTTGCTCGAGTTTGGTTGCCCAATGCTGACTCTCCTGGCCTTGCGATGGCACGGGCTTTTGGAGATTTTATTCTGAAAGACTTTGGTCTGATATCTGTTCCTGATGTCTCCCATCACCGCCTTACTGAGAAGGATGAATTTGTTGTATTAGCCACGGATGGGATTTGGGATGTTTTGTCGAACCAAGAAGTTGTAGACATTGTGGCATCTGTGTCACGCTCTTCTGCAGCTCGAACACTTGTTGAGACAGCTGTTCGAACATGGAGGACAAAGTACCCTACTCCCAAAGTTGATGATTGTGCTGTAGTGTGTCTCTTTTTTGATTCAGATTCAGACTCAAAGTCAGTTTACACCACAGACAAGGAGATGCCCGAGGCGTCAGTCAACCTTCAATCTGAGGGACCTGCTCCTGAAAATGGAGTTTAA 1089 0.4757 MTQALNTALLLKEKEEEPVTASRLEAADSVVDVRGSDCLVGLECFLNIVRALGMGSCLSAPHPLPYSPESTSDSAKRRRRLRRSSSLDSRTELGLHKIPGRMFVNGSSEVASLFCKQGKKGINQDAMLVWEACKVMDKELKLHPGIDCFCSGTTAVTLVKQGQDLVIGNVGDSRAILGTRDHDNSLIAVQLTIDLKPNLPREAERIKRCRGRVFALRNEPEVARVWLPNADSPGLAMARAFGDFILKDFGLISVPDVSHHRLTEKDEFVVLATDGIWDVLSNQEVVDIVASVSRSSAARTLVETAVRTWRTKYPTPKVDDCAVVCLFFDSDSDSKSVYTTDKEMPEASVNLQSEGPAPENGV 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0220 362 SUPERFAMILY PP2C-like 113 329 IPR036457 -
Prci4g0220 362 MobiDBLite consensus disorder prediction 334 362 - -
Prci4g0220 362 Gene3D - 107 330 IPR036457 -
Prci4g0220 362 MobiDBLite consensus disorder prediction 63 88 - -
Prci4g0220 362 MobiDBLite consensus disorder prediction 341 362 - -
Prci4g0220 362 CDD PP2Cc 131 328 IPR001932 -
Prci4g0220 362 PANTHER PROTEIN PHOSPHATASE 131 326 IPR015655 GO:0004722|GO:0006470
Prci4g0220 362 Pfam Protein phosphatase 2C 137 311 IPR001932 -
Prci4g0220 362 ProSiteProfiles PPM-type phosphatase domain profile. 1 328 IPR001932 -
Prci4g0220 362 SMART PP2C_4 69 326 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0220 Prci-Chr4 1501210 1505557 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0220 131 341 PP2C-type Phosphatase Gene Family AT1G16220 70.283 2.65e-111 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0220 - - gmx:100802479 358.221