Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0188 ATGGATAACCAAGATCATAGACGAATTCACACTCCAGGGCACGAGAGTCATGGAGTCTATGTATGCCACAAATGTGGATGGCCCTTTCCAAATCCGCATCCAAGTGCCAAACACAGGCGTGCTCACAAGAAGATCTGTGGAACCATTGAAGGTTATCAACTGTTCGACTCAGAGGGACAGCCCCATTCCAACGCTTCAGATGATTCTGACGATGATCACAAGATGCCAAGTCCAAAACCCGCCATGGAAATGAGTAAAAATTTGAAGGGTGTTGGTGGGATTGGAGAAAAATTAATTAGATCAGAAGATGAGGTTTTTTCAGATGCCGTTGCAGACTTTTCAGATGGTGGATTAAGTTCGGATTCAGCCATTAGTGTGGAAAAAATGGACCGAAAGGTTCCAAAACTTTCAGAGCTATCTGAAAATAAATGTTTTGATGCTGCAAGTGTGAGCCAGTTAATTGTCAAGTCGGGTGAGGGCTTCCAAGTTCAAAGTCCTGGAGCTTTGAAAAGTGAAGAGGTTGAGGTAGCAAAAACACCAGAGTTGCTGGGTCAACCATCAGGCTTTGTTGTGGAGCCATCTTCATTTTCTGATTCAGATTTGACGACTAAGGCATCAACTGTTGTAGATAGTGATGATTCCTTTGGTATTCCAAGTAACTCACATCTTAGCAAAGCTGAAGCCATGTCAGATGTAATTCCAGAAATGGGTATACATGTGACAGGTAGCAATTTGACTTCTGTTGCAGAGACTAATTTGAAAGGACTGGATGGGATTGAATCAGACAGAGACATGGTTGAGATTGCAAAATCTTTCAGTAATGCTGTAGATGAAACAAGTGAGAAATCTTCTAAAATAGAGGTTGGTGATGAGGAAACCTCAAGTGGTGAAATGGCTGAAGGAGCTGCTGCACTTGACCAAAAATACAATGCCAATTTATCTTCTGTGGTGTCTCAAGACAATGTTCTTCCTTCTGATGCAGATTCTGTTTCTGTCACAAATGCTTTTGCTATTGTTGTTCAGATGGAATCAAAACATATGCCACAGTTTGCTGCCTCTAGTAATCCAGTCAACGATTTTCAGGAAAAGGGAGAAGGAGATGTTAATGTCTTTACACTGTCTAATCCTGATTTAGCTCATTCTCAGAGTGAGTTTGAAAATTGTGTGGGTCAGGAAGGTGGAGTGGCAGTACAAAATCCTCTAAGCTTACACTTATCTGAACCATTGAAGCATGAGGAGGATGACTTAAAGATAACTTTGTCTGTGACTGAGGAGCCCCATTCCGATTACAACTCAAACCAACTGACTGAAGAAAAAGAGGTTCTCTTTCCTGATATGCATGCTTTAGATAATAGCATTAAGCAGGGGTGTATTAACAGTGACCCCTTGGTTGAAGTGACTGCTGTAGAGCATGCTGAAGTTTCTCCTGTGAAGCACATTTTTTATGGTGATCAAAGATCAATAGAAGTTGGAGCCTCTGAGGATTCTATGAAGTCTGAGATTAGTAAGACTTGTACTGTTGGCTCTTCTGAAGAACTGGGATCTGATGATGTTGGTAAAAATCTACAGCACAGAAATTTATTGGAAGGTAGTGTTATGGTCTCATCTGATGATTTGGAAGATTTTAAAGATTGTGAGGAAGAAGTTTCACGAAAATCTTTCAACAATCTACACTCAACTGAAGCATTTAAAGTTAAAGAAGGTGACTTGAAGGATACCATTAATGAGGAAAACCGTTCTGATTTCAAGTTGAGCCAATTGAGCAAAGAAAGGGAGATTATTTCTCCAGATGTGCGTGTTTCAGATGATATCATTAAGCAGGAGCTGGTCCACGATGAGTCTCAGGTTGAAGATGCACTTGCTGAAGAGCAAGCTGTAGTTTATCCAGTCACACTGACAGCTGAAAGTATTCAAAGATCAGATGAAATTAGAGGCTCAGTGAATACTGTGAACACTGAGAAGAATGAAAGCCATGCAGTTGGCTTCTCAGTAGCACATAAGCTCGATGATGCCTGTAAAACTTTGCAAGAGAAAAGTTTACTGGAAGATGGTATCCTGGCCTCATCTAAGGAGAATCTCAGAAATGTATCAATTGACTTCTTACCCAGTCAAACTAGTATACTTAGCAGAGACGGAACAAGTCATCATGAGAAAAAAAGAAATGATTTGGATGATGTAGTTGTAGACAGCAAATGCAAAGGAGGCGATGAGGAAAGTGATATTGGATTTGAGGTGGGAACTTTTCAGCCTAGTGATCTCTTGCAATTGGAAGGGGAGACATCAAGTGATTTATTTAAGAGTAGTGATGCTAGTGAAACAGGCAAAACAGAGAAATGTGATAAATATGATACTCAGGTTATGGGAGCCTCCCCTGTAAAAGATACGTTGTCACCCAATTCTGGTAGCATCCCATTTGAATCCCAAATTGTTTCAGAGGATGTAAGGGATGGGCAAGCAAGGAAGCCAACAGGTATTGACAGCACAGTTGTAAATGCAGTACCAGGTATTAAGGAAGACAGACAAGTAGATGAAATCATTAACAATAGCAAAGTAAAAGAAGAATGTAATACAGTTAGCAATACTTATTCTAATTTACCTCAAGCACAGGATACAGAGCCATCGAAGGCTGTGGAAAAACATGCTAAGGAACTTCCTCCACATTCTCATTTGGACACTGATCAATCTGCTCAATCTGTTCCTGCTGTTGAAGATAATACAGCTGTTGAACCTAGTGGGGATGACTCTGGAACTAGTATTGTGACTGCTTCAGATCGAAATGGAAATAACTTGGTTAAATTTGGTTCATCTGTTATTGATGCTTCAGTTGACTCTGGTAGTCGCTGTGACAGTTTGGAAGGAAACTGGGGTTCTGTTTCAGTTCTCTCTGTCCAATCTGATGCGCCAGCTATTACGGATGGTGAAGCTTTACCATCAGCAGAAACAGGGAAATCCAACTTGAACAGTTCTAAAGCTGCAGCTCAGGGACTGCAATCTGAAAAATCAGATATATTTGAACCACCATCTTTCATGACTCTGGTCGAACATGAACACATGGTTGGCCCAAAAGCTGCTGCTTCAGAAGGTCAGAAAGGACAGAACCCACAACAACCAAATCCTATGTCTTCGCAGGCTGGCTGGTTTCCCACCCTTACTCATGTTGTTAATGAGTCTCAAGGGAGAAAGAAGAATGAAGAAATTATAGCCAAGGTAACTAACTGGAGCACCAGTAAACAGAGCAGCACACCTTTGAAGAGCCTCCTGGGCGAGGCTGCCAATAGCAACAAGCCTAAGTCTCCGAAGTTGGACGGAAATCTAGCGTCTTCCAAAAATGGTGAAGTTGCAACAGATAATGACTCTGGATTGACAACTGTTAACTCCATTCTTGGTCCCGAATCCCCTGCTGCACAGGCTGCGAGAGACAAGGCTGGAAAAGAATGGAACTCCCCGGCAAGATATCCTGCTGACATCAAGAGGGAAAAGAGGAAAATCAAGAGCAGACCATATTGGGTACAGTTTGTATGCTGCTCTTCTGTGGATCCTCGGTGA 3546 0.4171 MDNQDHRRIHTPGHESHGVYVCHKCGWPFPNPHPSAKHRRAHKKICGTIEGYQLFDSEGQPHSNASDDSDDDHKMPSPKPAMEMSKNLKGVGGIGEKLIRSEDEVFSDAVADFSDGGLSSDSAISVEKMDRKVPKLSELSENKCFDAASVSQLIVKSGEGFQVQSPGALKSEEVEVAKTPELLGQPSGFVVEPSSFSDSDLTTKASTVVDSDDSFGIPSNSHLSKAEAMSDVIPEMGIHVTGSNLTSVAETNLKGLDGIESDRDMVEIAKSFSNAVDETSEKSSKIEVGDEETSSGEMAEGAAALDQKYNANLSSVVSQDNVLPSDADSVSVTNAFAIVVQMESKHMPQFAASSNPVNDFQEKGEGDVNVFTLSNPDLAHSQSEFENCVGQEGGVAVQNPLSLHLSEPLKHEEDDLKITLSVTEEPHSDYNSNQLTEEKEVLFPDMHALDNSIKQGCINSDPLVEVTAVEHAEVSPVKHIFYGDQRSIEVGASEDSMKSEISKTCTVGSSEELGSDDVGKNLQHRNLLEGSVMVSSDDLEDFKDCEEEVSRKSFNNLHSTEAFKVKEGDLKDTINEENRSDFKLSQLSKEREIISPDVRVSDDIIKQELVHDESQVEDALAEEQAVVYPVTLTAESIQRSDEIRGSVNTVNTEKNESHAVGFSVAHKLDDACKTLQEKSLLEDGILASSKENLRNVSIDFLPSQTSILSRDGTSHHEKKRNDLDDVVVDSKCKGGDEESDIGFEVGTFQPSDLLQLEGETSSDLFKSSDASETGKTEKCDKYDTQVMGASPVKDTLSPNSGSIPFESQIVSEDVRDGQARKPTGIDSTVVNAVPGIKEDRQVDEIINNSKVKEECNTVSNTYSNLPQAQDTEPSKAVEKHAKELPPHSHLDTDQSAQSVPAVEDNTAVEPSGDDSGTSIVTASDRNGNNLVKFGSSVIDASVDSGSRCDSLEGNWGSVSVLSVQSDAPAITDGEALPSAETGKSNLNSSKAAAQGLQSEKSDIFEPPSFMTLVEHEHMVGPKAAASEGQKGQNPQQPNPMSSQAGWFPTLTHVVNESQGRKKNEEIIAKVTNWSTSKQSSTPLKSLLGEAANSNKPKSPKLDGNLASSKNGEVATDNDSGLTTVNSILGPESPAAQAARDKAGKEWNSPARYPADIKREKRKIKSRPYWVQFVCCSSVDPR 1181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0188 1181 MobiDBLite consensus disorder prediction 885 923 - -
Prci4g0188 1181 MobiDBLite consensus disorder prediction 972 1002 - -
Prci4g0188 1181 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 42 IPR013087 -
Prci4g0188 1181 MobiDBLite consensus disorder prediction 861 880 - -
Prci4g0188 1181 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Prci4g0188 1181 MobiDBLite consensus disorder prediction 1089 1130 - -
Prci4g0188 1181 MobiDBLite consensus disorder prediction 1021 1045 - -
Prci4g0188 1181 MobiDBLite consensus disorder prediction 63 79 - -
Prci4g0188 1181 MobiDBLite consensus disorder prediction 978 996 - -
Prci4g0188 1181 MobiDBLite consensus disorder prediction 56 87 - -
Prci4g0188 1181 MobiDBLite consensus disorder prediction 1089 1149 - -
Prci4g0188 1181 MobiDBLite consensus disorder prediction 279 300 - -
Prci4g0188 1181 PANTHER PENTATRICOPEPTIDE REPEAT (PPR) SUPERFAMILY PROTEIN 539 1178 - -
Prci4g0188 1181 MobiDBLite consensus disorder prediction 890 923 - -
Prci4g0188 1181 MobiDBLite consensus disorder prediction 1028 1045 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci4g0188 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0188 - - pcin:129308784 2311.18