Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0180 ATGGCTCACCCGAAACTGAAAACCCTAGTTTCTCTCTCTATACTCATTTCCTCTCTCCTCTCCTTCGCCATAGCCGATGATGCAGCTTTCATGTCTAAGCTCGCCAAAGCCCTCTCCAATCCCTCCGGCTGGTCCAGCAGCACCTCTGTCTGCAAATGGGACGGCGTCAGTTGTGACAGCTCCAACCGCGTCACCTCTATCAACCTTGCTTCCAAGTCTCTTTCTGGCACTCTTCCTTCTGATCTCAACTCTCTCTCTCAGCTAACTTCCCTCTCTCTTCAGGACAATGCCCTCTCCGGTCCTTTACCGTCTCTGGCAAATCTCTCGTCCCTTCAAAGTGTGTTTCTTGACTCCAACAATTTCACCTCCATTCCTGAAGGTTGCTTCCAAGGGCTCACCAGCTTGCAGACCCTCAGCTTGAGCAACAACGCCGACCTTGCACCCTGGTCGTTTCCGACTGATTTGACCCAGTCTTCGAATCTGGTGACTCTTGATCTCGGAACCTCTAATCTCGTGGGTTCTTTGCCAGATATTTTTGACTCCTTACCGAGCTTGCAGAAGGTGCGTCTTTCTTACAACAACCTCACTGGTGGGTTGCCTGCCTCGTTTAATGGATCTGAAATTGCAAACTTATGGCTTAACAATCAAGTCAATGGATTATCCGGTACAATCGACGTGTTATCATCGATGCCCCAGTTGTCTCAGGTCTGGCTTCAGAAGAACCAGTTCACAGGTCCCATTCCCGACTTGTCCAACTGCAAGAGTTTGTTTGATTTGCAGCTTCGGGACAATCAGTTAACTGGTGTAGTCCCACCTTCTTTGATGTCTCTCTCGAGCTTGCAGAACGTTTCTTTGGACAATGATAAGCTGCAGGGCCCGATGCCTGAGTTTGGCAAAGGTGTGCAGGTTACTCTTGAGGGGAATAGCTTTTGTAAGAGTAGTCAGGGATCTTGTGATGATCGTGTTACGACGTTGCTTGAGATCGCTGCAGCTTTTGGGTATCCGATTAAGTTGGCAGATTCATGGGATGGCAATGACCCCTGCAATGATTGGAGTTCCATTGTGTGCACAGATGGAAAGATTACCACGGTGAATATGGCGAGGCAGAATTTCGGGGGAACAATTTCACCTGCATTTGCAAATTTAACGGATTTAAGGAACTTGTATCTGAATGGCAATAATTTGACTGGCTCAATACCCGAGAGCTTGACAACTTTGCCTCAACTTAAGATTCTTGATGTATCTAACAACAATCTATCTGGAAAGGTTCCCAAGTTCTCATCAAAGGTGAAGCTGACATCTACTGGCAATCTTTTGCTTGGAAAAACTATTGGTTCCGGAGGAGGAGTAAATGGAACTAGTCCTACCACAGGTTCTGGTGATATTTCACCGGCCGGAAGTCCATCTGGAAAGGGAACTAGCACTTCCTTGTCATCTGGCTGGATTGCAGGTATAGTCATTATTGTCCTATTTTTTGTGGCGGTGGTGTTGTTTGTCTCTTGTAAATGTTATGTAAAAAATCGTCATCAGAAATTTGGAAGGGTTAGCAATCCTGAAAATGGAAAGGGAGATGTTAAAATTGATGTATCGGGTGTTTCCAATGGATATGCTGGAGTTCCTAGCGAGTTACATAGCCAGAGCAGTGGCGACCGTAGTGACCTTCATGTTTTTGATGGTGGCAGTGCTACAATTTCGATTCAAGTTCTTCGCCAAGTAACGGATAATTTCAGTGAAGATAACATTTTGGGCAGGGGAGGATTTGGTGTTGTTTACAAAGGGGAATTGCATGATGGAACAAAAATTGCCGTGAAGAGGATGGAATCTGTTGCGATGGGAAGCAAAGGATTGAATGAATTCCAAGCAGAGATTGCAGTCCTTACTAAAGTCAGGCACAGGCATTTGGTTGCTCTTTTAGGATATTGCATTAATGGCAATGAAAGGCTTTTAGTTTATGAGTACATGCCTCAAGGCACACTAACACAGCATCTTTTTGAATGGCGTGAGAAGGGGTGCACTCCTCTGACTTGGAAGCAAAGGGTAGCAATAGCTTTGGATGTGGCAAGGGGAGTGGAATATTTGCATAGCTTAGCTCAACAAAGCTTCATTCACAGAGACTTGAAGCCTTCAAACATACTTCTAGGTGATGACATGAGAGCAAAGGTCGCAGATTTTGGGTTGGTTAAAAATGCACCTGACGGAAAGTATTCTGTTGAGACCCGTTTGGCTGGAACTTTTGGGTATCTTGCACCTGAATATGCAGCTACTGGAAGAGTGACAACCAAAGTCGATGTTTATGCATTTGGAGTTGTTTTGATGGAACTGATCACTGGTAGAAAGGCATTGGATGACACTGTCCCAGATGAAAGGTCTCACCTAGTGTCATGGTTCCGCAGGGTTCTAATCAACAAAGAGAACATCCCGAAGGCTATTGATCAAACTTTAGACCCGGACGAGGAGACAATGGAGAGCATATATAAGGTGGCCGAGCTTGCAGGGCACTGCACTGCTCGCGAGCCATACCAAAGGCCAGACATGGGCCATGCAGTGAATGTGCTGGTTCCTCTCGTGGAGCAGTGGAAACCAACTAACCACGAAGAAGAAGAAAGTTATGGAATTGACCTACACATGAGCCTACCTCAAGCTCTGCAAAGATGGCAAGCCAACGAAGGCACTTCTACAATGTTCAATGACATGTCCCTCTCACAAACCCAATCAAGCATCCCTTCTAAACCTTCGGGATTTGCAGACTCCTTTGGTTCAATGGATTGCAGGTGA 2775 0.4598 MAHPKLKTLVSLSILISSLLSFAIADDAAFMSKLAKALSNPSGWSSSTSVCKWDGVSCDSSNRVTSINLASKSLSGTLPSDLNSLSQLTSLSLQDNALSGPLPSLANLSSLQSVFLDSNNFTSIPEGCFQGLTSLQTLSLSNNADLAPWSFPTDLTQSSNLVTLDLGTSNLVGSLPDIFDSLPSLQKVRLSYNNLTGGLPASFNGSEIANLWLNNQVNGLSGTIDVLSSMPQLSQVWLQKNQFTGPIPDLSNCKSLFDLQLRDNQLTGVVPPSLMSLSSLQNVSLDNDKLQGPMPEFGKGVQVTLEGNSFCKSSQGSCDDRVTTLLEIAAAFGYPIKLADSWDGNDPCNDWSSIVCTDGKITTVNMARQNFGGTISPAFANLTDLRNLYLNGNNLTGSIPESLTTLPQLKILDVSNNNLSGKVPKFSSKVKLTSTGNLLLGKTIGSGGGVNGTSPTTGSGDISPAGSPSGKGTSTSLSSGWIAGIVIIVLFFVAVVLFVSCKCYVKNRHQKFGRVSNPENGKGDVKIDVSGVSNGYAGVPSELHSQSSGDRSDLHVFDGGSATISIQVLRQVTDNFSEDNILGRGGFGVVYKGELHDGTKIAVKRMESVAMGSKGLNEFQAEIAVLTKVRHRHLVALLGYCINGNERLLVYEYMPQGTLTQHLFEWREKGCTPLTWKQRVAIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVKNAPDGKYSVETRLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRKALDDTVPDERSHLVSWFRRVLINKENIPKAIDQTLDPDEETMESIYKVAELAGHCTAREPYQRPDMGHAVNVLVPLVEQWKPTNHEEEESYGIDLHMSLPQALQRWQANEGTSTMFNDMSLSQTQSSIPSKPSGFADSFGSMDCR 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0180 924 FunFam Leucine-rich repeat receptor-like kinase 320 443 - -
Prci4g0180 924 Gene3D Ribonuclease Inhibitor 319 443 IPR032675 -
Prci4g0180 924 SMART serkin_6 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0180 924 Pfam Protein tyrosine and serine/threonine kinase 579 850 IPR001245 GO:0004672|GO:0006468
Prci4g0180 924 PANTHER OSJNBA0070M12.3 PROTEIN 10 924 - -
Prci4g0180 924 Gene3D Phosphorylase Kinase; domain 1 540 653 - -
Prci4g0180 924 ProSiteProfiles Protein kinase domain profile. 576 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0180 924 Pfam Leucine rich repeat N-terminal domain 320 356 IPR013210 -
Prci4g0180 924 Pfam Leucine rich repeat N-terminal domain 31 59 IPR013210 -
Prci4g0180 924 FunFam Receptor-like kinase TMK4 25 316 - -
Prci4g0180 924 MobiDBLite consensus disorder prediction 902 924 - -
Prci4g0180 924 Gene3D Ribonuclease Inhibitor 26 318 IPR032675 -
Prci4g0180 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 701 713 IPR008271 GO:0004672|GO:0006468
Prci4g0180 924 SUPERFAMILY Protein kinase-like (PK-like) 564 883 IPR011009 -
Prci4g0180 924 CDD STKc_IRAK 582 855 - -
Prci4g0180 924 Pfam Leucine rich repeat 110 143 IPR001611 GO:0005515
Prci4g0180 924 Pfam Leucine rich repeat 377 419 IPR001611 GO:0005515
Prci4g0180 924 FunFam receptor protein kinase TMK1 654 871 - -
Prci4g0180 924 Gene3D Transferase(Phosphotransferase) domain 1 654 877 - -
Prci4g0180 924 SMART LRR_typ_2 182 205 IPR003591 -
Prci4g0180 924 SMART LRR_typ_2 108 131 IPR003591 -
Prci4g0180 924 SMART LRR_typ_2 382 405 IPR003591 -
Prci4g0180 924 SMART LRR_typ_2 406 428 IPR003591 -
Prci4g0180 924 SMART LRR_typ_2 132 153 IPR003591 -
Prci4g0180 924 SUPERFAMILY L domain-like 46 433 - -
Prci4g0180 924 ProSitePatterns Protein kinases ATP-binding region signature. 582 604 IPR017441 GO:0005524
Prci4g0180 924 FunFam receptor protein kinase TMK1 538 653 - -
Prci4g0180 924 MobiDBLite consensus disorder prediction 449 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0180 Prci-Chr4 1187958 1191891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0180 64 852 Receptor kinase-like Gene Family AT5G07280 33.091 1.09e-97 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Prci4g0180 PK_Tyr_Ser-Thr 5.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0180 K00924 - gmx:100781851 1410.59