Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci4g0158 | ATGGCATTGTGTAATAAACTTGGGAGTCTATTAAGGCAGAGTGCCGCACGGAGCGGACATGTACCGGTTGGGTCGATGCTGAATTATGTTCGCTGCATGTCATCCTCTAAGCTTTTCATTGGCGGCCTTTCTTATGGAGTTGATGATCAGTCTCTCAGGGATGCATTTACCAGCTTTGGAGATGTGGTAGAGGCAAGGGTTATAACTGATAGAGACACTGGAAGGTCAAGAGGGTTTGGATTCGTTAACTTCTCCAGTGACGAATCTGCAAGTTCAGCTCTTTCTGCAATGGATGGGCAGGAGCTAAATGGAAGAAACATTCGGGTGAGCTATGCAAATGACAGACCACCTAGACCTCGATCCTTTGGTGGCGGCGGCGGATATGGTGGCGGTGGTTATGGTAGGGATGATGGAGGTTTTGGCAATCCATCCTTCTAA | 438 | 0.4817 | MALCNKLGSLLRQSAARSGHVPVGSMLNYVRCMSSSKLFIGGLSYGVDDQSLRDAFTSFGDVVEARVITDRDTGRSRGFGFVNFSSDESASSALSAMDGQELNGRNIRVSYANDRPPRPRSFGGGGGYGGGGYGRDDGGFGNPSF | 145 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci4g0158 | 145 | SMART | rrm1_1 | 37 | 110 | IPR000504 | GO:0003723 | |
Prci4g0158 | 145 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 38 | 108 | IPR000504 | GO:0003723 | |
Prci4g0158 | 145 | SUPERFAMILY | RNA-binding domain, RBD | 31 | 142 | IPR035979 | GO:0003676 | |
Prci4g0158 | 145 | FunFam | Glycine-rich RNA-binding protein 2 | 25 | 144 | - | - | |
Prci4g0158 | 145 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 33 | 132 | - | - | |
Prci4g0158 | 145 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 36 | 114 | IPR000504 | GO:0003723 | |
Prci4g0158 | 145 | CDD | RRM2_NsCP33_like | 37 | 112 | - | - | |
Prci4g0158 | 145 | Gene3D | - | 31 | 143 | IPR012677 | - | |
Prci4g0158 | 145 | MobiDBLite | consensus disorder prediction | 110 | 145 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci4g0158 | Prci-Chr4 | 1043233 | 1045378 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci4g0158 | 36 | 118 | Eukaryotic Initiation Factors Gene Family | AT1G49760 | 31.325 | 1.65e-07 | 47.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci4g0158 | - | - | qsa:O6P43_002606 | 203.371 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Prci4g0158 | 4 | 1043233 | 1045378 | Prci4g0158 | 4 | 1043233 | 1045378 | ECH |