Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0147 ATGCGTTGCTATGCCGTGGCTATTCCCGGAAGCGATTATCGCTTCTTCGCCTCGACACCCTTATCTGTCCCCGCCAACAACACTTTCAATCCCAAATCTCTCAATTTCCCCTCTCAAATCGGCGGTTTCGTCCCTCTCAGAGTTAAAGCCGCCGTCAACGACGGCTATGTGGCCGAGGCCTCCAAGTTAAGCTTTTACGAGCTTCTGGGCATCCCTGAGTCTGGGTCCTTGCTCGAGATCAAGCAGGCTTACAAGCAGTTAGCGCGAAAGTACCACCCTGATGTGTCACCGCCGGATCGGGTCGAGGAGTATACGAGGAGATTCATTCAGGTGCAGGAGGCCTATGAGACCTTGTCTGATCCTAGAAGGAGAGCTTTGTATGACAGAGACATGTCAAGAGGGATTCACTTGGCCTTCTCCGCTCGCCGGCACTACTACGACGATGAGGTAATTGAACCAAAAAGTGAATGGAAAGCTCGTTGGCAAAGTCAGCTATCAGAGCTGAAGAGAAGAAGTAATCTGAAGGACAAGGGAGAAAATCTGTCGTGGGCAGCTCGAATGCGTCGTCAAAGAGAAGAATCGTGTAACGAGTCATAA 597 0.5092 MRCYAVAIPGSDYRFFASTPLSVPANNTFNPKSLNFPSQIGGFVPLRVKAAVNDGYVAEASKLSFYELLGIPESGSLLEIKQAYKQLARKYHPDVSPPDRVEEYTRRFIQVQEAYETLSDPRRRALYDRDMSRGIHLAFSARRHYYDDEVIEPKSEWKARWQSQLSELKRRSNLKDKGENLSWAARMRRQREESCNES 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0147 198 Gene3D DnaJ domain 52 156 IPR036869 -
Prci4g0147 198 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Prci4g0147 198 PANTHER CHAPERONE PROTEIN DNAJ 20 CHLOROPLASTIC 60 194 - -
Prci4g0147 198 Pfam DnaJ domain 65 128 IPR001623 -
Prci4g0147 198 SUPERFAMILY Chaperone J-domain 61 139 IPR036869 -
Prci4g0147 198 FunFam Chaperone protein dnaJ 20, chloroplastic 50 159 - -
Prci4g0147 198 SMART dnaj_3 63 123 IPR001623 -
Prci4g0147 198 ProSiteProfiles dnaJ domain profile. 64 131 IPR001623 -
Prci4g0147 198 CDD DnaJ 65 120 IPR001623 -
Prci4g0147 198 PRINTS DnaJ domain signature 123 142 IPR001623 -
Prci4g0147 198 PRINTS DnaJ domain signature 66 84 IPR001623 -
Prci4g0147 198 PRINTS DnaJ domain signature 84 99 IPR001623 -
Prci4g0147 198 PRINTS DnaJ domain signature 103 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0147 Prci-Chr4 922293 924289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0147 60 128 C2H2 Transcription Factor Family AT1G74250 41.667 1.09e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0147 - - qsa:O6P43_023570 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci4g0147 4 922293 924289 Prci4g0147 4 922293 924289 ECH