Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0131 ATGAGCAGCTCAGGACCTAGTGAAGGCCAGGCAGATGCTAGAGATTTTCAAAATCAGCAAATCGTGGTTTTTGACTTGGACCTCAACCTTCCTCTTCTTGAGGAGAACCTGGATGCAGCAGCTCAGGGATCAGCCCTTGATAATGAAAATTCTCAGTGGCGGATAGGTGATGCTGAACTTGATGATGTTGTTATAATCTCCCCAAGAAAATTTGAAGAAGCAAAGAACAGTTCTCGAAGAAAAAATGCTTGTCCAAGCTTTGTGGTTATTCCAGTTTTTGATGAGGAGAGAGGAAACATTTCAGAAGTGACAGCAGACGCAGTTTCTCACCCTATTAGTGACAACAGACATAAAACTCCACAAAACCAAGTGATTGTGGACTGTGAGCTGCACTTAGGTGTGAAAGACAGTAGGGTAGCCAAGAAAACTTATGTTCTTGCACCTCGGGTTGTGTCTCCAAGTACGGTGCCGCCCGAGGAACCCACCTTTAGCTGCACAATTTGCATGGGCCAGTTGATTGAAGCGACATCAACCAGGTGCGGCCACATTTTCTGCAAGAAGTGCATCCAGGCAGCAATAGCTGCTCAACACAAATGTCCCACCTGCAGGCGTAAACTTAGAAAATCTGACATGTTTAGGGTCTACCTTCCAACAGCTAACTAG 663 0.4555 MSSSGPSEGQADARDFQNQQIVVFDLDLNLPLLEENLDAAAQGSALDNENSQWRIGDAELDDVVIISPRKFEEAKNSSRRKNACPSFVVIPVFDEERGNISEVTADAVSHPISDNRHKTPQNQVIVDCELHLGVKDSRVAKKTYVLAPRVVSPSTVPPEEPTFSCTICMGQLIEATSTRCGHIFCKKCIQAAIAAQHKCPTCRRKLRKSDMFRVYLPTAN 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0131 220 PANTHER ELFLESS, ISOFORM B 3 219 - -
Prci4g0131 220 ProSitePatterns Zinc finger RING-type signature. 180 189 IPR017907 -
Prci4g0131 220 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 218 IPR013083 -
Prci4g0131 220 ProSiteProfiles Zinc finger RING-type profile. 165 203 IPR001841 -
Prci4g0131 220 Pfam Zinc finger, C3HC4 type (RING finger) 165 202 - -
Prci4g0131 220 SUPERFAMILY RING/U-box 164 208 - -
Prci4g0131 220 SMART ring_2 165 202 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0131 Prci-Chr4 824275 828123 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0131 57 218 C3H Transcription Factor Family AT5G48655 38.323 3.38e-26 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0131 K22651 - nnu:104590197 154.066