Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0111 ATGGCTGGCGTGTCTCTCCAGTGCGGCGACTGTGGAGCGCTATTGAGGTCCGTACAAGAAGCTCAGGAGCACGCAGAGCTCACCTCCCACTCCAACTTCTCTGAATCGACTGAAGCTGTTCTCAACCTTGTTTGCACCACTTGTGGCAAGCCATGCCGATCCAAAACTGAGAGTGATTTGCATACAAAAAGAACTGGGCACGGTGAATTTGTTGATAAGACATCTGAAGTAGCGAAACCAATAAGTTTGGAGGTTCCAAAGGTAGATGCAATGTCTAACGAGGATGTCAATGCAACTACTGACCAAAATGATGGTACTGCTCCACAGCCTAGTGAAATGGTTGTTCCTGAGGTTGACAAAAAGCTGCTTGAGGAACTTGAATTAATGGGTTTTTCAACTGCACGTGCAATACGTTCACTGCATTATTCTGGTAATGCTAGCCTTGAGGCAGCTGTGAATTGGGTAGTAGAGCATGAGAATGACGCTGACATAGATCAGATGCCCTTGGTACCTGCAAACACCAAAGTTGAGGCTCCTAAACCTTCTCTCACACCAGAACAACTGAAAGCTAAACAACAGGAACTTAGGGAGAGGGCTCGCAAGAAGAAAGAAGAGGAGGAGAAGAGGGTGGAAAGAGAAAGAGAAAAGGAGAGAATTCGTATAGGCAAGGAGTTACTGGAAGCAAAAAGAATTGAAGAGGAGAATGAAAGAAAACGGTTGCTGGCTCTGCGTAAAGCTGAGAAAGAGGAAGAGAGAAGGGCTAGAGAGAAAATCAGGCAGAAATTGGAAGAAGACAAGGCTGAAAGAAGGCGAAGACTTGGATTACCTCCTGAAGAACCATCAGCTCCCCAACCCGCTAATGTCGTGGAGGAGAAAAAAAGTTCATTGCCAGTTCGGCCTGCTACAAAAGCTGAGCAAATGAGAGAGTGCTTGCGGTCTCTCAAGCAGAGCCACAAGGATGATGATGCAAGAGTAAAGAGAGCATTCCAGACTCTACTAACTTATGTGGGGAATGTTGCCAAAAGTCCTGATGAGGAAAAATATAGGAGAATAAGACTCAGTAACCAAACTTTTCAGGAAAGAGTTGGTGCCTTGAAAGGGGGAATTGATTTCCTGGAAATTTGTGGGTTTGAGAAAATCGAAGGGGGAGAGTTCCTGTTTTTGACTAGGGACAAGGTTGACAAGGCAGTCCTGAATTCTGCTGGCTCTGAACTGGACTCTGCAATCAAAAATCCCTTTTTTGGAGTTCTTTAG 1254 0.4545 MAGVSLQCGDCGALLRSVQEAQEHAELTSHSNFSESTEAVLNLVCTTCGKPCRSKTESDLHTKRTGHGEFVDKTSEVAKPISLEVPKVDAMSNEDVNATTDQNDGTAPQPSEMVVPEVDKKLLEELELMGFSTARAIRSLHYSGNASLEAAVNWVVEHENDADIDQMPLVPANTKVEAPKPSLTPEQLKAKQQELRERARKKKEEEEKRVEREREKERIRIGKELLEAKRIEEENERKRLLALRKAEKEEERRAREKIRQKLEEDKAERRRRLGLPPEEPSAPQPANVVEEKKSSLPVRPATKAEQMRECLRSLKQSHKDDDARVKRAFQTLLTYVGNVAKSPDEEKYRRIRLSNQTFQERVGALKGGIDFLEICGFEKIEGGEFLFLTRDKVDKAVLNSAGSELDSAIKNPFFGVL 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0111 417 MobiDBLite consensus disorder prediction 93 109 - -
Prci4g0111 417 Pfam UBA/TS-N domain 123 154 IPR015940 -
Prci4g0111 417 CDD UBA_PUB_plant 117 165 - -
Prci4g0111 417 SUPERFAMILY PUG domain-like 302 413 IPR036339 -
Prci4g0111 417 Pfam PUB domain 324 395 IPR018997 -
Prci4g0111 417 Coils Coil 223 268 - -
Prci4g0111 417 MobiDBLite consensus disorder prediction 175 214 - -
Prci4g0111 417 SMART PGNneu 327 390 - -
Prci4g0111 417 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 117 158 IPR015940 -
Prci4g0111 417 MobiDBLite consensus disorder prediction 90 111 - -
Prci4g0111 417 SUPERFAMILY UBA-like 102 171 IPR009060 GO:0005515
Prci4g0111 417 MobiDBLite consensus disorder prediction 190 214 - -
Prci4g0111 417 Gene3D - 119 165 - -
Prci4g0111 417 ProSitePatterns Zinc finger C2H2 type domain signature. 8 30 IPR013087 -
Prci4g0111 417 PANTHER F13M7.16 PROTEIN 1 417 - -
Prci4g0111 417 SMART uba_6 119 157 IPR015940 -
Prci4g0111 417 CDD PUB_UBA_plant 311 417 - -
Prci4g0111 417 Coils Coil 188 220 - -
Prci4g0111 417 MobiDBLite consensus disorder prediction 261 308 - -
Prci4g0111 417 MobiDBLite consensus disorder prediction 261 276 - -
Prci4g0111 417 Gene3D - 309 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0111 Prci-Chr4 709708 736999 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0111 101 417 C2H2 Transcription Factor Family AT1G04850 76.875 6.63e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0111 K24348 - jre:109003439 597.816