Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0110 ATGGCTGGCGTGTCTCTCCAGTGCGGCGACTGTGGAGCGCTATTGAGGTCCGTACAAGAAGCTCAGGAGCACGCAGAGCTCACCTCCCACTCCAACTTCTCTGAATCGACTGAAGCTGTTCTCAACCTTGTTTGCACCACTTGTGGCAAGCCATGCCGATCCAAAACTGAGAGTGATTTGCATACAAAAAGAACTGGGCACGGTGAATTTGTTGATAAGACATCTGAAGTAGCGAAACCAATAAGTTTGGAGGTTCCAAAGGTAGATGCAATGTCTAACGAGGATGTCAATGCAACTACTGACCAAAATGATGGTACTGCTCCACAGCCTAGTGAAATGGTTGTTCCTGAGGTTGACAAAAAGCTGCTTGAGGAACTTGAATTAATGGGTTTTTCAACTGCACGTGCAATACGTTCACTGCATTATTCTGGTAATGCTAGCCTTGAGGCAGCTGTGAATTGGGTAGTAGAGCATGAGAATGACGCTGACATAGATCAGATGCCCTTGGTACCTGCAAACACCAAAGTTGAGGCTCCTAAACCTTCTCTCACACCAGAACAACTGAAAGCTAAACAACAGGAACTTAGGGAGAGGGCTCGCAAGAAGAAAGAAGAGGAGGAGAAGAGGGTGGAAAGAGAAAGAGAAAAGGAGAGAATTCGTATAGGCAAGGAGTTACTGGAAGCAAAAAGAATTGAAGAGGAGAATGAAAGAAAACGGTTGCTGGCTCTGCGTAAAGCTGAGAAAGAGGAAGAGAGAAGGGCTAGAGAGAAAATCAGGCAGAAATTGGAAGAAGACAAGGCTGAAAGAAGGCGAAGACTTGGATTACCTCCTGAAGAACCATCAGCTCCCCAACCCGCTAATGTCGTGGAGGAGAAAAAAAGTTCATTGCCAGTTCGGCCTGCTACAAAAGCTGAGCAAATGAGAGAGTGCTTGCGGTCTCTCAAGCAGAGCCACAAGCAGGATGATGATGCAAGAGTAAAGAGAGCATTCCAGACTCTACTAACTTATGTGGGGAATGTTGCCAAAAGTCCTGATGAGGAAAAATATAGGAGAATAAGACTCAGTAACCAAACTTTTCAGGAAAGAGTTGGTGCCTTGAAAGGGGGAATTGATTTCCTGGAAATTTGTGGGTTTGAGAAAATCGAAGGGGGAGAGTTCCTGTTTTTGACTAGGGACAAGGTTGACAAGGCAGTCCTGAATTCTGCTGGCTCTGAACTGGACTCTGCAATCAAAAATCCCTTTTTTGGAGTTCTTTAG 1257 0.4551 MAGVSLQCGDCGALLRSVQEAQEHAELTSHSNFSESTEAVLNLVCTTCGKPCRSKTESDLHTKRTGHGEFVDKTSEVAKPISLEVPKVDAMSNEDVNATTDQNDGTAPQPSEMVVPEVDKKLLEELELMGFSTARAIRSLHYSGNASLEAAVNWVVEHENDADIDQMPLVPANTKVEAPKPSLTPEQLKAKQQELRERARKKKEEEEKRVEREREKERIRIGKELLEAKRIEEENERKRLLALRKAEKEEERRAREKIRQKLEEDKAERRRRLGLPPEEPSAPQPANVVEEKKSSLPVRPATKAEQMRECLRSLKQSHKQDDDARVKRAFQTLLTYVGNVAKSPDEEKYRRIRLSNQTFQERVGALKGGIDFLEICGFEKIEGGEFLFLTRDKVDKAVLNSAGSELDSAIKNPFFGVL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0110 418 MobiDBLite consensus disorder prediction 93 109 - -
Prci4g0110 418 CDD UBA_PUB_plant 117 165 - -
Prci4g0110 418 Coils Coil 223 268 - -
Prci4g0110 418 Gene3D - 309 408 - -
Prci4g0110 418 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 117 158 IPR015940 -
Prci4g0110 418 MobiDBLite consensus disorder prediction 90 111 - -
Prci4g0110 418 SUPERFAMILY UBA-like 102 171 IPR009060 GO:0005515
Prci4g0110 418 Pfam UBA/TS-N domain 123 154 IPR015940 -
Prci4g0110 418 Gene3D - 119 165 - -
Prci4g0110 418 CDD PUB_UBA_plant 311 418 - -
Prci4g0110 418 PANTHER F13M7.16 PROTEIN 1 418 - -
Prci4g0110 418 ProSitePatterns Zinc finger C2H2 type domain signature. 8 30 IPR013087 -
Prci4g0110 418 SMART PGNneu 328 391 - -
Prci4g0110 418 SMART uba_6 119 157 IPR015940 -
Prci4g0110 418 Pfam PUB domain 325 396 IPR018997 -
Prci4g0110 418 SUPERFAMILY PUG domain-like 312 414 IPR036339 -
Prci4g0110 418 Coils Coil 188 220 - -
Prci4g0110 418 MobiDBLite consensus disorder prediction 261 308 - -
Prci4g0110 418 MobiDBLite consensus disorder prediction 261 276 - -
Prci4g0110 418 MobiDBLite consensus disorder prediction 195 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0110 Prci-Chr4 709708 737000 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0110 101 418 C2H2 Transcription Factor Family AT1G04850 76.636 2.97e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0110 K24348 - jre:109003439 593.193