Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0088 ATGGGGGTCAAGGCTAAGAAAGCAATGAAGAAGAGTCTGAAAAAGGCCAAAGCTGCGGTATCTGTTCCAAGCAAGAAAACAGAGGGCGACTTCTTGCCCTTGGAAGGTGGTCCTGCACGCAAACTTCCTGAACATAAGTTGCTAGAGAACACAGCCAGTGTGTTATATGTAGGTCGGATACCACATGGATTCTATGAGAAGGAGATGGAAGGCTTTTTTGGACAATTTGGTACCATCAGGAGGTTGAGAATTGCAAGAAATAAAAAGACAGGAAAATCTAAACATTTTGGCTTCATACAATTTGAGTCTCCCGAGGTGGCAAAAATTGTAGCTGAGACCATGCACAATTATCTGCTACAGGAACATGTTCTGCAGGTTCATCTGATACCTCCAGAGGATGTTCACCCAAAATTATGGAGGGGCTTCAATTATCGGTTCAAGCCATTGGACTCTTCTAAAATTGAAAGGATGCGGCTTGGCAAGGAAAGAACATTGGAAGAGCAACAAAAGTTGGTTGAAAAGATCATGAAGCGTAACGAAAAACGACGAAAGAGGATAGAGGCTGCTGGGATTGATTATGAATGCCCTGAGATTGTGGGCACCGTCCAGCCTGGTCCTAAGAAAATAAAGTTTGAAGACTGA 642 0.4346 MGVKAKKAMKKSLKKAKAAVSVPSKKTEGDFLPLEGGPARKLPEHKLLENTASVLYVGRIPHGFYEKEMEGFFGQFGTIRRLRIARNKKTGKSKHFGFIQFESPEVAKIVAETMHNYLLQEHVLQVHLIPPEDVHPKLWRGFNYRFKPLDSSKIERMRLGKERTLEEQQKLVEKIMKRNEKRRKRIEAAGIDYECPEIVGTVQPGPKKIKFED 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0088 213 CDD RRM_NIFK_like 54 127 - -
Prci4g0088 213 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 53 131 IPR000504 GO:0003723
Prci4g0088 213 Gene3D - 3 128 IPR012677 -
Prci4g0088 213 SMART rrm1_1 54 127 IPR000504 GO:0003723
Prci4g0088 213 Coils Coil 165 185 - -
Prci4g0088 213 SUPERFAMILY RNA-binding domain, RBD 44 142 IPR035979 GO:0003676
Prci4g0088 213 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 55 124 IPR000504 GO:0003723
Prci4g0088 213 PANTHER MKI67 FHA DOMAIN-INTERACTING NUCLEOLAR PHOSPHOPROTEIN 6 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0088 Prci-Chr4 670452 674676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0088 55 126 Eukaryotic Initiation Factors Gene Family AT1G71770 34.722 3.12e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0088 K14838 - gmx:100814276 311.612