Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0079 ATGAAGCTCTCAGCCTTGAATGTTTTCAACACACGCAGACGAGAGACATCAGAGAGTATGGGGGAGGTAGTAAGTGAAGAAGTGTTCATTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCAGAAGCGGAGAAGAACATTTACAAATACATATTGGGCTTCGTTGAGATGGCAGTCGTGAAATGCGCCATCGAACTCAACATAGCAGAGGCCGTTGAAAGCCACCACGCTCCCGTGACGCTTTCCCAGCTCTCGTCAGCCCTGAACTGCGACCCCTCCATGCTGTACCGCATCATGCGCTTCCTCACCAGCCGAAACATCTTCAAACAAGCATCCACCGCCCACGACGCCGGCCGGCATCAGCGAGCCTACGTCCACACCCCGCTCTCCCGGCTCCTGATCAAGAAGAGCGAGGCCAGCATGGCGGCCTTTGTGATGCTGGAGAGCAGCCCCGTAATGCTGGCGCCATGGCATAATTTGAGCGGCAGGGTCCGGGAGAACGGGACTCCGTCGTTCACGAAGGCTCACGGGAAGGACGTGTGGAGCTACGCGGAGGCGAATGCGGAGCACGGCGAGCTGATAAACGAGGCGATGGCGTGCGATGCCCGGAGAGGGATGAGGGAGATCGTGGAGCACTGCCGGGAGGCGTTCGAAGGGGTGAGATCGGTGGTGGACGTGGGCGGAGGGAACGGAACCGCCATGAGAGTGCTGGCGAGGGCATGCCCGTGGCTAAAATGCATCAACCTGGATCTTCCGCACGTAGTGTCGGCGGTTTCCGAGTGCCGGGGGGTGGTGCACGTGGGAGGCGACATGTTCGTGAGCGTTCCGCAAGCAGATGCCGCTTTTCTCATGTGGGTGCTGCATGACTGGGGAGACGAGGAGTGCGTAGAGATCCTGAAGAGGTGCAGGGAGGCCATAAGAGAGAAGGGAAGGGTGATCATAGCGGAGGCAGTGATCGAAGAAGGAGGAGGAGAGGGAGAGGAGCTCGAGGAGGTGGGGCTGATGCTGGACATGGTCATGATGGCTCACACCAACATCGGCAAGGAGAGGACCTTGACGGAGTGGGACCACGTCATCACGGCGGCCGGATTCTCCACCTTCACTGTCCGCCACCTCCCTTCTCCTGTCAAGTCCCTCATCGTCGCCTTCCCCTGA 1158 0.5846 MKLSALNVFNTRRRETSESMGEVVSEEVFISSSSSSSSSSSAEAEKNIYKYILGFVEMAVVKCAIELNIAEAVESHHAPVTLSQLSSALNCDPSMLYRIMRFLTSRNIFKQASTAHDAGRHQRAYVHTPLSRLLIKKSEASMAAFVMLESSPVMLAPWHNLSGRVRENGTPSFTKAHGKDVWSYAEANAEHGELINEAMACDARRGMREIVEHCREAFEGVRSVVDVGGGNGTAMRVLARACPWLKCINLDLPHVVSAVSECRGVVHVGGDMFVSVPQADAAFLMWVLHDWGDEECVEILKRCREAIREKGRVIIAEAVIEEGGGEGEELEEVGLMLDMVMMAHTNIGKERTLTEWDHVITAAGFSTFTVRHLPSPVKSLIVAFP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0079 385 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 49 385 IPR016461 GO:0008168
Prci4g0079 385 PIRSF O-mtase 27 385 IPR016461 GO:0008168
Prci4g0079 385 Gene3D - 33 134 IPR036388 -
Prci4g0079 385 Pfam O-methyltransferase domain 158 366 IPR001077 GO:0008171
Prci4g0079 385 SUPERFAMILY "Winged helix" DNA-binding domain 42 137 IPR036390 -
Prci4g0079 385 FunFam O-methyltransferase family protein 136 384 - -
Prci4g0079 385 CDD AdoMet_MTases 224 315 - -
Prci4g0079 385 Gene3D Vaccinia Virus protein VP39 135 377 IPR029063 -
Prci4g0079 385 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 139 382 IPR029063 -
Prci4g0079 385 Pfam Dimerisation domain 60 104 IPR012967 GO:0046983
Prci4g0079 385 PANTHER O-METHYLTRANSFERASE 58 365 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0079 Prci-Chr4 605708 607075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0079 61 370 Monolignol Biosynthesis Gene Families AT5G54160 34.921 8.64e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0079 K22588 - gmx:100782951 400.208