Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0062 ATGAGAGGAAGGAGCTATAGTCCGTCACCGCCCAGGGGTTATGGCAGAAGAGGAAGAAGTCCTAGCCCCAGAGGTCGTTATGGTGGCCGTGGCAGAGATCTCCCAACCAGTCTTCTAGTTCGCAACCTTCGCCACGACTGTAGGCCTGAGGATCTTCGTAGACTCTTTGGACAATTTGGTGCTCTTAAGGACATTTACCTACCGAAAGATTATTATACTGGAGAACCCCGAGGCTTTGGTTTTGTCCAATATGTAGATCCTGCTGATGCTGCGGATGCAAAATATCATGTGGATGGTCAAATTCTTCTTGGTCGAGAGTTGACTGTTGTTTTTGCTGAGGAAAACAGAAAGAAGCCCACTGAGATGAGAGCAAGAGAAAGAAGGGGCCGATTTTCTGATCGAAGAAGGTCTCCACCTCGTTATTCTCACTCTCCTCGATACTCTCGTTCTCCGCCACGTCATAGATCTCGGTCTCGAAGTCGTGATTATTATTCTCCCCCTCCTAAACGAAGGGAGTATTCAAGGTCGGTGTCACCTGAAGATAGAAGATACAGTCGAGAAAGGGAGAGAGGGAGATCATACTCACGCTCTCCACCCTACAACGGTGGCTCAAGGAGTCGTAGTCAGAGTCCAGCCAAGGGTCAAAGCCGGAGCCGCAGTCAGAGTCCGAATCGTGATGATTATGCTGGGGAACCAGCTCGTGGTCGGTCGCCCAGTCAATGA 723 0.5007 MRGRSYSPSPPRGYGRRGRSPSPRGRYGGRGRDLPTSLLVRNLRHDCRPEDLRRLFGQFGALKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHVDGQILLGRELTVVFAEENRKKPTEMRARERRGRFSDRRRSPPRYSHSPRYSRSPPRHRSRSRSRDYYSPPPKRREYSRSVSPEDRRYSRERERGRSYSRSPPYNGGSRSRSQSPAKGQSRSRSQSPNRDDYAGEPARGRSPSQ 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0062 240 MobiDBLite consensus disorder prediction 117 240 - -
Prci4g0062 240 MobiDBLite consensus disorder prediction 197 225 - -
Prci4g0062 240 SUPERFAMILY RNA-binding domain, RBD 36 141 IPR035979 GO:0003676
Prci4g0062 240 Gene3D - 4 128 IPR012677 -
Prci4g0062 240 SMART rrm1_1 37 110 IPR000504 GO:0003723
Prci4g0062 240 MobiDBLite consensus disorder prediction 1 33 - -
Prci4g0062 240 MobiDBLite consensus disorder prediction 117 140 - -
Prci4g0062 240 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 35 223 - -
Prci4g0062 240 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 38 107 IPR000504 GO:0003723
Prci4g0062 240 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 36 114 IPR000504 GO:0003723
Prci4g0062 240 MobiDBLite consensus disorder prediction 157 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0062 Prci-Chr4 524334 528926 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0062 36 166 Eukaryotic Initiation Factors Gene Family AT4G34110 25.954 2.76e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0062 K12900 - gmx:100775883 272.707