Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0038 ATGGCAACTTTAATTGAGCCACCCAATAAAGTTGGGCCAAAGGGGAAGCATTATTACTCCATATGGCAAACAGTGTTTGAGATTGATACAAAGTACGTCCCAATAAAACCCATCGGCCGAGGAGCATATGGTGTAGTATGTTCTTCCATCAACAGGGAAACCAATGAGAAAGTTGCAATTAAGAAGATTGGTAATATATTTGAGAATCGCGTTGATGCATTGAGAACACTGAGGGAATTGAAGTTGCTTAGACATATTAGGCACGAGAATGTGATTGCTTTGAAGGATGTTATGTTGCCTGCCCAGAGAACAAGTTTCAAGGATGTGTACTTGGTTTATGAGCTCATGGATACAGATCTTCATCAAATAATTAAATCTTCGCAGCCCCTTTCCAATGATCATTGCAAATATTTTATATTTCAGTTGCTTCGAGGTCTCAAATATCTTCACTCCGCAAATATCCTTCATCGGGACTTGAAGCCTGGAAATCTGCTCATCAATGCCAATTGTGATCTGAAGATATGTGACTTTGGGCTTGCACGAACAAATGGAGGTGATGGCCAATTCATGACCGAGTATGTTGTGACTCGCTGGTATCGTGCTCCGGAGCTCCTCTTATGCTGTGAGAATTATGGAACCTCGATTGACGTGTGGTCTGTAGGATGCATTTTTGCGGAGATTCTTGGCAGAAAACCAATCTTTCCCGGAACTGAATGCCTCAACCAGTTGAAACTCATCATACGTGTTCTGGGAAGCCAGGACGAGTCTGATCTCGCGTTTATTGACAATCCAAAGGCCAGGAGGTACATCAAATCACTGCCCTACACAAGAGGCGTGCACTTGTCTCAGCTATACCCGCAAGCAGATCCATTAGCCATGGATTTATTGCAGAAAATGCTGGTGTTTGATCCAACCAAGAGAATTACTATCGTGGAAGCGCTGCAACACCCCTATATGGTGGGCCTTTACGATCCCAGATCTAATCCTCCGGCCCAGGTTCCAATCAATCTCGACATAGACGAAAACTGGAGGGAACCCACGATTAGGGAAATGATGTGGAATGAGATGCTTCATTATCATCCGGAAGCTTCTGCCAATGCATAG 1104 0.4384 MATLIEPPNKVGPKGKHYYSIWQTVFEIDTKYVPIKPIGRGAYGVVCSSINRETNEKVAIKKIGNIFENRVDALRTLRELKLLRHIRHENVIALKDVMLPAQRTSFKDVYLVYELMDTDLHQIIKSSQPLSNDHCKYFIFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNGGDGQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIIRVLGSQDESDLAFIDNPKARRYIKSLPYTRGVHLSQLYPQADPLAMDLLQKMLVFDPTKRITIVEALQHPYMVGLYDPRSNPPAQVPINLDIDENWREPTIREMMWNEMLHYHPEASANA 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0038 367 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Prci4g0038 367 SUPERFAMILY Protein kinase-like (PK-like) 24 325 IPR011009 -
Prci4g0038 367 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Prci4g0038 367 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0038 367 CDD STKc_TEY_MAPK 26 361 - -
Prci4g0038 367 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0038 367 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 31 320 - -
Prci4g0038 367 FunFam Mitogen-activated protein kinase 116 345 - -
Prci4g0038 367 FunFam Mitogen-activated protein kinase 18 126 - -
Prci4g0038 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Prci4g0038 367 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Prci4g0038 367 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0038 367 Gene3D Phosphorylase Kinase; domain 1 19 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0038 Prci-Chr4 349064 351893 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0038 1 363 MAP Kinase Gene Family AT2G18170 86.226 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Prci4g0038 Pkinase 7.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0038 K20537 - gmx:100783422 690.263