Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0021 ATGGGCAACTGCTGGTTTTCCAGGGAATCCTCTGTTTACCGAGTGTCATCCAATGCTAAGTCAGACTCAACCAAAGACCATATTCATTCCGTCAAATCACGGAATGATGATAGTAAGTTACCATCCAACCCCGAAGAAGTGGAAGTCCTGCGCCGCGATTCAGCTGCAAAGCCTTTGATTGCCTTCACGTACGATGAACTAAAGGCGGAAGTCATATTTCTCGGGCAGCTTTCTCATCCAAATTTGGTCCAATTAATTGGATACTGCTGCGAAGATGAACATAGGGTGCTTATATATGAGTATATGGCCAGAGGAAGCGTGGAAAACAATCTCTTTTCCAGAGTATTGCTGCCCCTGCCATGGTCCTTAAGAATGAAGATCGCATTTGGCGCTGCTAAGGGACTTGCATTTCTTCATGAAGCAGAGAAGCCTGTTATCTATCGTGACTTTAAGACATCAAATATATTATTGGACCTGGACTACAATGCAAAACTTTCAGATTTCGGCCTTGCCAAGGATGGACCTGTTGGGGACAAATCTCACGTCTCCACTCGCATAATGGGAACTTACGGATACGCTGCACCCGAATACATATTGACTGGTCATCTGACCCCTAGAAGTGATGTGTACAGCTTTGGGGTTGTTCTTCTTGAACTTTTGACGGGAAGAAAATCTCTAGACAAGTCAAGGCCCGCTCGGGAGCAGAACCTTGCAGATTGGGCCCTTCCCTTGCTGAAGGAAAAGAAGAAATTGTTGAATATAATTGATCCCAGACTAGAAGGCGATTATCCTATAAAAGGAGTCCACAAGGCCGCAATGCTAGCTTATCATTGCTTGAACCGCAATCCAAAAGCAAGGCCTTTAATGCGAGATATAGTAGATTCATTGGAGCCTTTGCAGCTTCACAATGAGGTTTCTATTGGAAAAACATTGACCATCATCAGTGAGGTTCCTCAACCCGAATTAAAAAGGAAAGATGCTGAATAA 987 0.4417 MGNCWFSRESSVYRVSSNAKSDSTKDHIHSVKSRNDDSKLPSNPEEVEVLRRDSAAKPLIAFTYDELKAEVIFLGQLSHPNLVQLIGYCCEDEHRVLIYEYMARGSVENNLFSRVLLPLPWSLRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYILTGHLTPRSDVYSFGVVLLELLTGRKSLDKSRPAREQNLADWALPLLKEKKKLLNIIDPRLEGDYPIKGVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQLHNEVSIGKTLTIISEVPQPELKRKDAE 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0021 328 Pfam Protein kinase domain 65 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0021 328 Gene3D Phosphorylase Kinase; domain 1 29 102 - -
Prci4g0021 328 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Prci4g0021 328 Gene3D Transferase(Phosphotransferase) domain 1 103 313 - -
Prci4g0021 328 FunFam Probable serine/threonine-protein kinase PBL8 102 315 - -
Prci4g0021 328 SUPERFAMILY Protein kinase-like (PK-like) 62 294 IPR011009 -
Prci4g0021 328 PANTHER OS01G0588500 PROTEIN-RELATED 63 300 - -
Prci4g0021 328 MobiDBLite consensus disorder prediction 20 46 - -
Prci4g0021 328 ProSiteProfiles Protein kinase domain profile. 1 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0021 328 MobiDBLite consensus disorder prediction 17 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0021 Prci-Chr4 133887 138544 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0021 66 320 Glycoside Hydrolase AT3G07070 53.101 3.80e-89 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci4g0021 Pkinase 1.1e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0021 - - gmx:100775722 525.013