Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci4g0020 ATGGGCAACTGCTGGTTTTCCAGGGAATCCTCTGTTTACCGAGTGTCATCCAATGCTAAGTCAGACTCAACCAAAGACCATATTCATTCCGTCAAATCACGGAATGATGATAGTAAGTTACCATCCAACCCCGAAGAAGTGGAAGTCCTGCGCCGCGATTCAGCTGCAAAGCCTTTGATTGCCTTCACGTACGATGAACTAAAGGTAATCACTGGAAATTTTAGGCAAGATCGTCTTTTAGGTGGAGGAGGATTTGGAAGTGTTTATAAGGGTTTTATTTCTGAGGACGTCAGAGAGGGCCTTCCTCCTCTTCCTGTAGCTGTCAAGGTACATGATGGTGACAACAGTCATCAAGGGCACAGAGAATGGCTGGCGGAAGTCATATTTCTCGGGCAGCTTTCTCATCCAAATTTGGTCCAATTAATTGGATACTGCTGCGAAGATGAACATAGGGTGCTTATATATGAGTATATGGCCAGAGGAAGCGTGGAAAACAATCTCTTTTCCAGAGTATTGCTGCCCCTGCCATGGTCCTTAAGAATGAAGATCGCATTTGGCGCTGCTAAGGGACTTGCATTTCTTCATGAAGCAGAGAAGCCTGTTATCTATCGTGACTTTAAGACATCAAATATATTATTGGACCTGGACTACAATGCAAAACTTTCAGATTTCGGCCTTGCCAAGGATGGACCTGTTGGGGACAAATCTCACGTCTCCACTCGCATAATGGGAACTTACGGATACGCTGCACCCGAATACATATTGACTGGTCATCTGACCCCTAGAAGTGATGTGTACAGCTTTGGGGTTGTTCTTCTTGAACTTTTGACGGGAAGAAAATCTCTAGACAAGTCAAGGCCCGCTCGGGAGCAGAACCTTGCAGATTGGGCCCTTCCCTTGCTGAAGGAAAAGAAGAAATTGTTGAATATAATTGATCCCAGACTAGAAGGCGATTATCCTATAAAAGGAGTCCACAAGGCCGCAATGCTAGCTTATCATTGCTTGAACCGCAATCCAAAAGCAAGGCCTTTAATGCGAGATATAGTAGATTCATTGGAGCCTTTGCAGCTTCACAATGAGGTTTCTATTGGAAAAACATTGACCATCATCAGTGAGGTTCCTCAACCCGAATTAAAAAGGAAAGATGCTGAATAA 1155 0.4433 MGNCWFSRESSVYRVSSNAKSDSTKDHIHSVKSRNDDSKLPSNPEEVEVLRRDSAAKPLIAFTYDELKVITGNFRQDRLLGGGGFGSVYKGFISEDVREGLPPLPVAVKVHDGDNSHQGHREWLAEVIFLGQLSHPNLVQLIGYCCEDEHRVLIYEYMARGSVENNLFSRVLLPLPWSLRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDLDYNAKLSDFGLAKDGPVGDKSHVSTRIMGTYGYAAPEYILTGHLTPRSDVYSFGVVLLELLTGRKSLDKSRPAREQNLADWALPLLKEKKKLLNIIDPRLEGDYPIKGVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQLHNEVSIGKTLTIISEVPQPELKRKDAE 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci4g0020 384 PANTHER OS01G0588500 PROTEIN-RELATED 33 356 - -
Prci4g0020 384 Pfam Protein tyrosine and serine/threonine kinase 76 352 IPR001245 GO:0004672|GO:0006468
Prci4g0020 384 ProSiteProfiles Protein kinase domain profile. 74 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci4g0020 384 FunFam Serine/threonine-protein kinase BIK1 41 157 - -
Prci4g0020 384 SUPERFAMILY Protein kinase-like (PK-like) 49 352 IPR011009 -
Prci4g0020 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Prci4g0020 384 FunFam Probable serine/threonine-protein kinase PBL8 158 371 - -
Prci4g0020 384 ProSitePatterns Protein kinases ATP-binding region signature. 80 109 IPR017441 GO:0005524
Prci4g0020 384 MobiDBLite consensus disorder prediction 20 46 - -
Prci4g0020 384 Gene3D Phosphorylase Kinase; domain 1 35 157 - -
Prci4g0020 384 Gene3D Transferase(Phosphotransferase) domain 1 158 369 - -
Prci4g0020 384 MobiDBLite consensus disorder prediction 17 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci4g0020 Prci-Chr4 133887 138544 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci4g0020 3 352 Glycoside Hydrolase AT3G07070 47.945 2.88e-106 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Prci4g0020 PK_Tyr_Ser-Thr 5.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci4g0020 - - cpap:110809524 662.144