Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci496g0003 ATGGTCGATCCGACAGGAAAAGGATCGCAGGCCGAGGACGCCAATAACAGAAGCCCTAACTCTGATTCATCGGAAGGAAGCCCAATGAGCAACGAGCAGAAGAAAACCTGCGCCGACTGTGGCACTTCAAAAACCCCTCTCTGGAGAGGCGGTCCGGCCGGGCCCAAGTCTCTGTGCAACGCTTGTGGGATCAGAAGCAGGAAGAAGAAGAGAGCTATTCTGGGTATGAACAAGGGAAGTATAGAAGACAAGAAGGGCAAAAGAAGCAACAATGCGAAAATTGGGGATAGTTTGAAGCAGAGATTGATGGCTCTGGGGAGGGAGGTTTTGATGCAGAGATCGTCTGTGGAGAGGCAGAGAAAGAAGCTGGGAGAGGAAGAACAAGCGGCCGTGCTGTTGATGGCTCTCTCATACGGCTCTGTTTATGCTTAA 432 0.5139 MVDPTGKGSQAEDANNRSPNSDSSEGSPMSNEQKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGMNKGSIEDKKGKRSNNAKIGDSLKQRLMALGREVLMQRSSVERQRKKLGEEEQAAVLLMALSYGSVYA 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci496g0003 143 CDD ZnF_GATA 36 71 IPR000679 GO:0006355|GO:0043565
Prci496g0003 143 PANTHER OS01G0976800 PROTEIN 7 143 - -
Prci496g0003 143 MobiDBLite consensus disorder prediction 1 52 - -
Prci496g0003 143 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 29 71 - -
Prci496g0003 143 ProSiteProfiles GATA-type zinc finger domain profile. 31 67 IPR000679 GO:0006355|GO:0043565
Prci496g0003 143 Pfam GATA zinc finger 37 71 IPR000679 GO:0006355|GO:0043565
Prci496g0003 143 MobiDBLite consensus disorder prediction 9 40 - -
Prci496g0003 143 ProSitePatterns GATA-type zinc finger domain. 37 62 IPR000679 GO:0006355|GO:0043565
Prci496g0003 143 Gene3D - 31 94 IPR013088 GO:0006355|GO:0008270
Prci496g0003 143 SMART GATA_3 31 81 IPR000679 GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci496g0003 1 143 C2C2-Gata Transcription Factor Family AT3G06740 62.745 4.50e-54 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Prci496g0003 GATA 1.4e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci496g0003 - - qsa:O6P43_021814 225.328