Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci496g0002 ATGGTCTCTTCCGAAGGATCGCAGGCCGAGGACGCCAATAACAGAAGCCCTAACTCTGATTCATCGGAAGGAAGCCCAATGAGCAACGAGCAGAAGAAAACCTGCGCCGACTGTGGCACTTCAAAAACCCCTCTCTGGAGAGGCGGTCCGGCCGGGCCCAAGTCTCTGTGCAACGCTTGTGGGATCAGAAGCAGGAAGAAGAAGAGAGCTATTCTGGGTATGAACAAGGGAAGTATAGAAGACAAGAAGGGCAAAAGAAGCAACAATGCGAAAATTGGGGATAGTTTGAAGCAGAGATTGATGGCTCTGGGGAGGGAGGTTTTGATGCAGAGATCGTCTGTGGAGAGGCAGAGAAAGAAGCTGGGAGAGGAAGAACAAGCGGCCGTGCTGTTGATGGCTCTCTCATACGGCTCTGTTTATGCTTAA 426 0.5141 MVSSEGSQAEDANNRSPNSDSSEGSPMSNEQKKTCADCGTSKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGMNKGSIEDKKGKRSNNAKIGDSLKQRLMALGREVLMQRSSVERQRKKLGEEEQAAVLLMALSYGSVYA 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci496g0002 141 CDD ZnF_GATA 34 69 IPR000679 GO:0006355|GO:0043565
Prci496g0002 141 ProSitePatterns GATA-type zinc finger domain. 35 60 IPR000679 GO:0006355|GO:0043565
Prci496g0002 141 SMART GATA_3 29 79 IPR000679 GO:0006355|GO:0043565
Prci496g0002 141 MobiDBLite consensus disorder prediction 1 38 - -
Prci496g0002 141 PANTHER OS01G0976800 PROTEIN 8 141 - -
Prci496g0002 141 ProSiteProfiles GATA-type zinc finger domain profile. 29 65 IPR000679 GO:0006355|GO:0043565
Prci496g0002 141 MobiDBLite consensus disorder prediction 1 50 - -
Prci496g0002 141 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 27 69 - -
Prci496g0002 141 Gene3D - 29 92 IPR013088 GO:0006355|GO:0008270
Prci496g0002 141 Pfam GATA zinc finger 35 69 IPR000679 GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci496g0002 27 141 C2C2-Gata Transcription Factor Family AT3G06740 74.576 3.69e-52 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Prci496g0002 GATA 1.3e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci496g0002 - - qsa:O6P43_021814 218.394