LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci494g0005	ATGTCATCTTTAAAGAAACGAATAATTATTGGCACCATCACCTCAGCTGTGATTGTTACCATATTAACAGCTAACCCATCCTTCCGTGTACCGCCAATAATCTCTATCCTCGTCGGCACAACTGCAGCAAGTACCATAATAATAGTTATCAGTTGGGTTCTTATTAAAAAATATAAGCACCAAAGGAGAAATAATCCTGCACAAGTTGCAGATGAAGGAGATAGTGCAATAAACACACAGTTTCTAACATATAGGGTGGATAGATTTCTGAATGATATTGAAAAAGAGAAGCCAATCAGGTTCAGCTCAAAACATCTCATGCTTGCAACTAACAACTACAACAACATTCTGGGATCAGGAGGATTTGGAGCAGTTTATAAAGGAGCTCTTAATGATGGAACCATTGTGGCAGTGAAAGTTCTGCATGCCATTTCAAACAAGAGAATAGAGGAACAGTTCATGGCAGAAGTGGGTACAATTGGAAGAGTTCATCATTTCAATCTAGTTCGTCTCTTTGGATTTTGCTTTGAAAAGAATATGAGGGCTCTGGTTTATGAGTACATGAGTAATGGCTCTCTTGACAAGTATTTGCTTGGCGAAAAAAGTCTCTTAGCATTTGAAAAGCTCCATGAGATTGCAGTTGGAACAGCTAAAGGTATTGCTTACTTGCATGAAGAATGCCAACAAAGAATCATCCATTATGACATAAAGCCAGAAAACATCCTATTAGATCAAAATTTCTGTCCTAAGGTTGCTGATTTTGGTTTAGCCAAGCTTTATAACAGGGAAAAATCTCACATTACAGTGACAGGATTGAGAGGGACACCTGGTTATGCTGCACCAGAGCTTTGGATGCCATTTCCTATAACCCACAAATGCGATATTTATAGTTTTGGAATGCTGTTATTTGAAATCATAGGTAGGAGAAGGAATGTTGATAAGAAAGTCACAGAGAGTGAACAATGGTTTCCAAAACTAGTTTGGATAAACTTTGAGTGTGGGAAACTAAAAGAGTTGATAGCATTATGTGGGATAGAGGAGAAGGATAAGGAGATGGCAGAAAGAATGATTAAGATGGCTCTTTGGTGTGTTCAGTATAAATCTGATTTAAGACCCATGATGAGTGATGTGGTGAAAATGTTGGAGGGTTTGATAGATATTCCTGAATGCCCTTCAAACCCTTTTCAACACTTAATGGATGATTCAGTTGATTCAAGCTGGTCTCTTGAAGTAACAAAGTCTCAAATCGATGGTACAGCCCCTATCATGAGAAAGTATGAGATCGAAATAAACGCTTTAGATGGAAATACATCTTCCCTTTATTTGGATTCTTCCCATGGTTAA	1344	0.3795	MSSLKKRIIIGTITSAVIVTILTANPSFRVPPIISILVGTTAASTIIIVISWVLIKKYKHQRRNNPAQVADEGDSAINTQFLTYRVDRFLNDIEKEKPIRFSSKHLMLATNNYNNILGSGGFGAVYKGALNDGTIVAVKVLHAISNKRIEEQFMAEVGTIGRVHHFNLVRLFGFCFEKNMRALVYEYMSNGSLDKYLLGEKSLLAFEKLHEIAVGTAKGIAYLHEECQQRIIHYDIKPENILLDQNFCPKVADFGLAKLYNREKSHITVTGLRGTPGYAAPELWMPFPITHKCDIYSFGMLLFEIIGRRRNVDKKVTESEQWFPKLVWINFECGKLKELIALCGIEEKDKEMAERMIKMALWCVQYKSDLRPMMSDVVKMLEGLIDIPECPSNPFQHLMDDSVDSSWSLEVTKSQIDGTAPIMRKYEIEINALDGNTSSLYLDSSHG	447

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci494g0005	447	SUPERFAMILY	Protein kinase-like (PK-like)	96	382	IPR011009	-
	Prci494g0005	447	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	231	243	IPR008271	GO:0004672\|GO:0006468
	Prci494g0005	447	FunFam	Putative receptor-like protein kinase	188	389	-	-
	Prci494g0005	447	Pfam	Protein kinase domain	115	379	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci494g0005	447	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	34	391	-	-
	Prci494g0005	447	Gene3D	Phosphorylase Kinase; domain 1	87	187	-	-
	Prci494g0005	447	Gene3D	Transferase(Phosphotransferase) domain 1	188	391	-	-
	Prci494g0005	447	FunFam	serine/threonine-protein kinase PBS1-like	85	187	-	-
	Prci494g0005	447	SMART	serkin_6	111	385	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci494g0005	447	ProSiteProfiles	Protein kinase domain profile.	111	385	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci494g0005	447	ProSitePatterns	Protein kinases ATP-binding region signature.	117	139	IPR017441	GO:0005524

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci494g0005	100	403	Receptor kinase-like Gene Family	AT5G38280	41.346	1.52e-79	258

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-Os	Prci494g0005		Pkinase	4.5e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci494g0005	-		-	pcin:129297340	518.85