LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci494g0004	ATGTTTCAGTGCTCTATATATGATATTGTGATTTGCTTCTTGTTTTATTTCTTGACCGAGAAGACATTTTTCGGATTCAATCCAGAGTTCATCATGGGTACTCAATCCAGTTCTTCATATATGGGGGAGATTGAATCTGGATCTTTCACTCAGAAAGAGGAATCGGAGTTGATGATGAGTCAACCCAGATTTGTCATTCTGAGATTAATTTGCTTATGCGCAGTGATTGTTGGCGTTATTATAATAGCTACCACGTCTGGATCGACAATCGCTATCATCATCAGCTCAGTTGTGGGTTTTTTCATGATAAAGATTGCCCTGGTGATTCTTAAAACTCGCAAGGACGGAGAGCGCAGAGATACAGAAGCGGCCATAAGACCGAATAGTGCGAATGCAGAGTTTTTGGCTTGCACAGTGGATAAGTTCCTGAATGATATTGAAAAAGACGAGCCAGTCAGATTCACCACACATCAGCTCATGCTTGCAACCAACAACTATACTAACAAGCTGGGCTCAGGAGGATTCGGTGCCGTCTATAGAGGGGTCTTAGTAGATGGATCCATTGTTGCGGTGAAGGTCTTGCATGAGATTTCTGATCACCAGAGAATAGAGGACCAGTTCATGGCAGAAGTGGGCACAATTGGAAGGGTTCATCATTTGAATCTGGTTCGTCTTTTTGGATTTTGCTTTGAAAACAATATGAGGGCTCTAGTTTATGAATACATGAGTAATGGTTCTCTTGACAAGTATTTGTTTTGTGAAAACAATATCTTAGCGTTCCAAAAGCTTCATGAGATTGCAGTTAGGACTGCAAAAGGGATTGCTTACTTGCATGAAGAATGCCAGCAAAGAATCATCCACTACGACATAAAGCCGGAAAACATTCTTTTGGATCAAAACTTCTGTCCTAAGGTTGCTGACTTCAGTTTAGCCAAGATTTTCAACAGGGAAAAGTCTCACGTCACGATGACAGGATTGAGAGGGACGCCTGGTTATGCTGCACCAGACCTTTGGCTGCCATTTCCGGTAACGCACAGGTGCGACGTTTATAGTTTTGGAATGTTGTTATTTGAAATCATAGGTAGGAGAAGGAACCATGACATGAACCTTCCAGAAAGCCAAGAATGGTTTCCGAGAGAGGTTTGGACAAAATTTAATAGCGGAGAGTTAGAAGAGTTGACGACAGATTGTGGGATGGCAGATAAAGAGATAGTTGAAAGAATGTCAAAGGTGGCTCTTTGGTGTGTTCAGTATAGACCAGAATTGAGACCCATGATGAGTGTTGTGGCAAAAATGTTGGAAACTTTGATGGATATTCCAAACCCTTCTAACCCTTTTCGGCATCTCATGGATGAAGATCACTCTATTCATTCTTCCAATTGA	1383	0.4158	MFQCSIYDIVICFLFYFLTEKTFFGFNPEFIMGTQSSSSYMGEIESGSFTQKEESELMMSQPRFVILRLICLCAVIVGVIIIATTSGSTIAIIISSVVGFFMIKIALVILKTRKDGERRDTEAAIRPNSANAEFLACTVDKFLNDIEKDEPVRFTTHQLMLATNNYTNKLGSGGFGAVYRGVLVDGSIVAVKVLHEISDHQRIEDQFMAEVGTIGRVHHLNLVRLFGFCFENNMRALVYEYMSNGSLDKYLFCENNILAFQKLHEIAVRTAKGIAYLHEECQQRIIHYDIKPENILLDQNFCPKVADFSLAKIFNREKSHVTMTGLRGTPGYAAPDLWLPFPVTHRCDVYSFGMLLFEIIGRRRNHDMNLPESQEWFPREVWTKFNSGELEELTTDCGMADKEIVERMSKVALWCVQYRPELRPMMSVVAKMLETLMDIPNPSNPFRHLMDEDHSIHSSN	460

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci494g0004	460	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	285	297	IPR008271	GO:0004672\|GO:0006468
	Prci494g0004	460	Pfam	Protein kinase domain	168	427	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci494g0004	460	ProSiteProfiles	Protein kinase domain profile.	164	436	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci494g0004	460	FunFam	Putative receptor-like protein kinase	242	441	-	-
	Prci494g0004	460	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	87	443	-	-
	Prci494g0004	460	SUPERFAMILY	Protein kinase-like (PK-like)	148	435	IPR011009	-
	Prci494g0004	460	ProSitePatterns	Protein kinases ATP-binding region signature.	170	192	IPR017441	GO:0005524
	Prci494g0004	460	Gene3D	Transferase(Phosphotransferase) domain 1	242	445	-	-
	Prci494g0004	460	Gene3D	Phosphorylase Kinase; domain 1	139	241	-	-
	Prci494g0004	460	FunFam	serine/threonine-protein kinase PBS1-like	138	241	-	-
	Prci494g0004	460	SMART	serkin_6	164	437	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci494g0004	153	446	Receptor kinase-like Gene Family	AT5G38280	40.461	1.23e-70	234

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-Os	Prci494g0004		Pkinase	2.1e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci494g0004	-		-	pcin:129297340	898.271