Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci493g0002 ATGCTGTGGGGTGAATTTGTGGGAAGCAGTTGGAGTAGAGAATTTGTGGCAGGAGGTGTAGGGGGTATGGCTGGAGTGATCTCTGGTTATCCACTGGACACCCTCCGAATCCACCAACAGAACTCAAACATGCCAACTTCTGTGTTCAGCTTGATCAAAGATGTTGTGTCCAACGAAGGCCTTGCCTCTCTATACAGGGGCATGGCTGCTCCTTTGGCCGCTATTACTTTTCAGAATGCTATGATTTTCCAAACTTATGCAGTTCTCTCAAGAGCTTTTGACTCATCAGTCTCAGAAAATAGCCCTCCTTCCTACAGGAGCGTTGCTCTAGCAGGACTCATAACCGGTGCTTTACAAAGCACAATTGTCTCCCCAGTAGAACTGGTCAAAATTCGCCTCCAGCTTCAGAGAAAAGGCCAATTAAAAGAATCCTGTGAAGGTCCTCTATCAGCCACAAGGAAGATATGGAAAAGAGAAGGTCTTCGAGGAATATTCCAGGGATTCAGCATCACAATTCTCCGGGATGCACCTGGTCATGGTGTATATTTCTGGACATATGAATATATGAGGGAACAACTTCACCCAGGTTGCAGAAAAACTAGTCAAGAAAGCTTGAACACAATGCTAATAGCAGGAGGATTAGCTGGGGTAGTGAGTTGGATTGGTTCCTACCCTTTTGATGTTATAAAGACAAGACTCCAGGCTCAAACACAATCATCACTGAAATACACAGGAATCCTTGATTGCGTGGGACAGAGTGTCAGAGAAGAAGGGCATAATGTTTTGTGGAGGGGTATAGGAACTACAGTGGGTAGAGCTTTTATAGTGAATGGTGCTGTGTTTGCTGCTTATGAGATTGCTATGAGAAGCCTGTCAAACAGTGGAAGTAGCAGCACTAAAAATCTAGGAGATCCATCCTTTTCTAGAAACTCAAGACAATGA 942 0.4459 MLWGEFVGSSWSREFVAGGVGGMAGVISGYPLDTLRIHQQNSNMPTSVFSLIKDVVSNEGLASLYRGMAAPLAAITFQNAMIFQTYAVLSRAFDSSVSENSPPSYRSVALAGLITGALQSTIVSPVELVKIRLQLQRKGQLKESCEGPLSATRKIWKREGLRGIFQGFSITILRDAPGHGVYFWTYEYMREQLHPGCRKTSQESLNTMLIAGGLAGVVSWIGSYPFDVIKTRLQAQTQSSLKYTGILDCVGQSVREEGHNVLWRGIGTTVGRAFIVNGAVFAAYEIAMRSLSNSGSSSTKNLGDPSFSRNSRQ 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci493g0002 313 MobiDBLite consensus disorder prediction 292 313 - -
Prci493g0002 313 Pfam Mitochondrial carrier protein 108 193 IPR018108 -
Prci493g0002 313 Pfam Mitochondrial carrier protein 10 93 IPR018108 -
Prci493g0002 313 Pfam Mitochondrial carrier protein 207 293 IPR018108 -
Prci493g0002 313 PRINTS Mitochondrial carrier protein signature 121 135 IPR002067 GO:0055085
Prci493g0002 313 PRINTS Mitochondrial carrier protein signature 167 187 IPR002067 GO:0055085
Prci493g0002 313 PRINTS Mitochondrial carrier protein signature 218 236 IPR002067 GO:0055085
Prci493g0002 313 PRINTS Mitochondrial carrier protein signature 108 121 IPR002067 GO:0055085
Prci493g0002 313 PRINTS Mitochondrial carrier protein signature 263 281 IPR002067 GO:0055085
Prci493g0002 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Prci493g0002 313 Gene3D Mitochondrial carrier domain 9 303 IPR023395 -
Prci493g0002 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Prci493g0002 313 SUPERFAMILY Mitochondrial carrier 10 285 IPR023395 -
Prci493g0002 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 92 IPR018108 -
Prci493g0002 313 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 9 291 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci493g0002 2 304 Antiporters AT1G79900 60.396 1.78e-128 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci493g0002 K15109 - gmx:100812056 419.083