Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci492g0001 ATGTCAAATCTGCATTACATGTCCAATTTTTTGCTGTTTCTTGTTCTTCTTCTGATGCAAAATCCAAGCACAACGCTGTGCCATACAAAGGGATTGCGACCAAGGCGTTCTCCTGTGACTTCATCGACGACCAACATGAGCCGAATCCAATTCTCAGAACAGCAATTCCTGAAATGGATCAAGTTCGTCGGTGGCCTCAGACACTCTGTTTTCGGCATAGCCAAAAACAAGCTTTTTCCCTCTTACACTCTGCACGTCTCCAAGAAGCCGTCTTCAGGACAATTTTCGTCAATTCAAGGCGCAATCGATTCACTTCCGTTCCTCAATCTTGTGAGAGTCGTCCTAAAGGTCCACGCAGGGGTTTACACGGAGAAAGTGAATATTCCTCCTATGAAATCCTTCATAACCATACAAGGAGCAGGAGCAGACAAAACCATAGTTCAATGGGGAGACACAGCTCAAACAAAAGGGCCAGATGGGAAGCCACTGGGAACCTACGGATCAGCAACATTTGCTGTAAATGCGCCATACTTCATCGCCAAGAACATCACATTCAAAAACACGGCCCCAATTCCCGCACCAGGAGCAGTGGGGAAGCAAGCAGTGGCATTGAGAATATCAGCAGACACAGCAACATTTGTAGCATGTAAATTCTTAGGAGCACAAGACACACTGTATGATCATGTGGGAAGGCACTACTATAAAGACTGCTACATCGAAGGCTCAGTAGATTTCATATTCGGGGACGGCCTGTCTCTGTTCGAGAGATGTCACGTGCATGCGATAGCGCAGAACATAGGGGCCTTAACAGCACAGGGAAGGAACAGCATATTGGAGGACACAGGATTCTCGTTCGTGCACTGCAAGGTCACGGGTTCAGGGGCACTGTACCTGGGGAGGGCATGGGGTCCTTTCTCTCGCGTGGTCTTCGCTTACACCAATATGGACAACATCATCATCCCCAAAGGCTGGTACAACTGGGGCGACCCTAGCCGTGAAATGACTGTGTTCTATGGACAGTACAAGTGCACAGGACCAGGAGCCAGATTTGCAGGCAGAGTTGCTTGGTCAAGAGAGCTCACTGATGAGGAAGCTAAGCCTTTTATTTCACTTAGCTTCATTGACGGCTTCGAATGGATCAAATTGTAG 1149 0.4795 MSNLHYMSNFLLFLVLLLMQNPSTTLCHTKGLRPRRSPVTSSTTNMSRIQFSEQQFLKWIKFVGGLRHSVFGIAKNKLFPSYTLHVSKKPSSGQFSSIQGAIDSLPFLNLVRVVLKVHAGVYTEKVNIPPMKSFITIQGAGADKTIVQWGDTAQTKGPDGKPLGTYGSATFAVNAPYFIAKNITFKNTAPIPAPGAVGKQAVALRISADTATFVACKFLGAQDTLYDHVGRHYYKDCYIEGSVDFIFGDGLSLFERCHVHAIAQNIGALTAQGRNSILEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTNMDNIIIPKGWYNWGDPSREMTVFYGQYKCTGPGARFAGRVAWSRELTDEEAKPFISLSFIDGFEWIKL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci492g0001 382 FunFam Pectinesterase 80 382 - -
Prci492g0001 382 ProSitePatterns Pectinesterase signature 2. 239 248 IPR033131 -
Prci492g0001 382 Gene3D - 81 382 IPR012334 -
Prci492g0001 382 SUPERFAMILY Pectin lyase-like 79 381 IPR011050 -
Prci492g0001 382 Pfam Pectinesterase 89 376 IPR000070 GO:0030599|GO:0042545
Prci492g0001 382 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 76 381 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci492g0001 1 380 Carbohydrate Esterase AT5G47500 43.045 6.59e-102 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci492g0001 K01051 - qsa:O6P43_007857 652.899