Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci475g0001 ATGTCGAGCAATTCGCTGCCGCCATCGCATCTCTCTAATACATCGCCGACGAACCCTACCGGCTATGATTCCACTTCGAAGATATCATCGCCGGCATCCTCCAGAGCCAAGCTCCAGAAAAGTCCTCCGATTCCGAATCGGTGGACTGCGATAGAGGATGAAGGCGAGCAAAGGAACGAGGAGGCGGTACGTAAACTAGAACAGGAGCGAACCGAAGAAGCTAATCCTACGATTTTGCTTGCATCCTCTTTAGGGCTCAATCACATTCGGACTCGCTCGGCTTCTTCGCCTCTTCGGTTTCCGTCCTTGGCTGGCGCGTCTCCCAGTTCGAGCAAGGATTGCATCGGAACTGAGGATCGAATTGTAGTTTCAACGGATTTGGGAAAGAGAATATATGGAACTCAAAGTAAATTATCGAGAGCTCCTTCCCATGCTGTTCCTCTCACGCAGGGTAACGATGACATATTTGCCAAAGAATTGCAGTCCCCGCGCGTTCAAGCAATACTGCGCGTCACAAGTGGACGCAAGAAGAAACCTATCGATTTCAAAAGCTACTCTCATGAGCTCAACTCAAGAGGAGTCAAAGCTTTCCCAGTTTGGAAACATCGTGTATTCGGGCATATCGAGGAGGTTGAGGTTGCAATCAGAACTAAGTTTGGAAAGCTGAAGGAAGAAGTAGATTCTGACCTAAGTGCTTTTGCCGGAGATTTGGTGGGACTACTGGAAAAAACTTTGGGGTCTCATCCTGAATGTAGAGAGAGCTTGGAGGATCTGTTAATTGTTGCCCAACAATGTGCAATGATGTCGCCCAGCGAGTTTTGGATGAACTGCGAAGCCATTGTTCAGAATTTAGATGACAGGCGTCAAGAGTTACCGATGGGGATTCTCAAGCAAGCTCATACACGCCTACTGTTTATCCTCACTCGATGCACACGTCTCGTGCAGTTCAACAAAGAGAATGGCTATGAACAAGATCACATTCTGGGTCTTCACCAACTCAGTGATCTTGGCATTTATAGAGAGCAAATTTTGCATGCTGTAGAACATAAATCCATTGGTGGAAACGAGATGGCTGAGGAACAGCGAACCAAGTCTGCAGTTAAAGAACCAGACAATCAGATAACTCAAATTCAAACTGATCGGAATGTGAATACTGCAACTGACACTTCCAGAAGTGGTGATTCAACTGGAAGCGGCTATAAGATTTCATCCTGGAAAAAGTTTCCTAGTCATATTGAGAAAAAGAGTGAATATAAAGGTCAGGATGCCGAAGATTTGCCGTCGAAGGAAGAACAGGATCAGGTTCATGTCAAAGAAGAAAATGTCGAAAACGTGGATACTGATTCATCCAATCCTGAACAGTCAGAACTATCCTCCAGAGCTCAAAAGGTACACTGGGGATTCTGGGGAGATCCCCACAATCTAACATATGAGAACTCAATGATCTGCAGAATATGTGAGGTTGAAATACCAATTGTGTATGTGGAGGAGCACTCTCAAATATGCACTATTGCCGATAGATGTGATTTAAAAGGTCTTAACGTGAATGAACGGCTTGAAAGATTTGCCGAAACTATTGAAAAGATAATCGAATCATGGACACCAAGAAGCACACCTAAAAGCACCCCAAAAAGTACCCCAAAAAGTACCGACGGTCCTGGAGAAAGCTTTGAGAATGCGAGAGTATCTACTTCAAGTTTGCATGATGAGTTCAATGATTTATCTCTCGTGAGAAACAGCTTATCTCGTCGAGGCTCAGAAGACATGCTTGATTCTGTTCCCGAAGCTGACAATACTTTTATTAAGGATGATCTGAACCTTTTGCCAAAAAGGTCATGTGAAAAATATTTCAAACACGATCAATGCTCAAAGATGTCTTCAGTCGGAAGCTTGACACCCAGATCACCATTATTAACCCCACGAACAAGTCAGATAGAAATGTTATTAAGTGGGCGAAGAACAATATTGGAACTAGAGAGTTATTTCCAGATTAACAAACTAGTGGAAATTGCTCGTTCTGTTGCAAATGTGAATGACTACAGATCTTTGAACTATGTAAGTCGTCGCGTAGAAGAACTTAATCTCACCATTCAGGACAGAAAGGTCGATGCTCTCATTGTTGAAACTTTTGGGCGACGCATAGAGACTCTCTTGTCGGAAAAATATTTATCTCTTTGCGATCAACTAGACAACGAAAAGGTAGACTCATCGAATGGCTTGGTTGAAGAAGAGAGTTCAGTGGAAGATGATACTATTCGAAGCCTTCGTGCTAGCCCAATTCACCATTGTTCTAGGGATCGAACCTCCATCGAAGACTTCGAAATAATAAAACCAATAAGCCGAGGTGCATTCGGACGAGTTTTCCTAGCCAGGAAAAGAGCAACCGGAGATTTGTTTGCCATAAAGGTTCTGAAAAAGGCTGATATGATCCGCAAAAATGCAGTTGAAAGTATTTTGGCTGAGCGAGACATCCTTATATCAGTTCGAAATCCCTTTGTGGTTCGATTTTTCTACTCTTTCACTTGTAGGGAAAATCTTTATTTGGTTATGGAATTTTTAAATGGTGGAGACCTTTACTCTCTATTGAGAAATCTAGGTTGTTTAGATGAAGATATGGCACGTGTATATATTGCCGAAGTTGTGCTTGCATTGGAGTATTTACATTCCTTACATGTAATTCATAGAGACTTGAAGCCTGATAACTTGTTGATTGGCCAAGATGGTCACATCAAGTTGACAGATTTTGGGCTCTCCAAGGTTGGTCTTATTCACAGCACGGATGACTTATCAACTTCATCATTTTCTACTGATGATCTTGTAGGAAATGATGAACCAAAAAAAGATCGTTCTTCAAAAGTCGAACAACGTCAAAAGCAGTCAGTTGTTGGCACCCCAGATTATTTGGCACCTGAAATACTTCTCGGCATGGGACATGGTGCAACTGCAGATTGGTGGTCTGTGGGTATCATCCTTTATGAGCTCCTTGTGGGTATTCCACCATTTAATGCAGAACATCCGCACCAAATTTTTGACAAAATAATTAACAGAGACATACAGTGGCCAAATGTACCTGAGGAGATGAGCTATGAAGCATGTGATTTGATTGACAAGTAA 3114 0.4271 MSSNSLPPSHLSNTSPTNPTGYDSTSKISSPASSRAKLQKSPPIPNRWTAIEDEGEQRNEEAVRKLEQERTEEANPTILLASSLGLNHIRTRSASSPLRFPSLAGASPSSSKDCIGTEDRIVVSTDLGKRIYGTQSKLSRAPSHAVPLTQGNDDIFAKELQSPRVQAILRVTSGRKKKPIDFKSYSHELNSRGVKAFPVWKHRVFGHIEEVEVAIRTKFGKLKEEVDSDLSAFAGDLVGLLEKTLGSHPECRESLEDLLIVAQQCAMMSPSEFWMNCEAIVQNLDDRRQELPMGILKQAHTRLLFILTRCTRLVQFNKENGYEQDHILGLHQLSDLGIYREQILHAVEHKSIGGNEMAEEQRTKSAVKEPDNQITQIQTDRNVNTATDTSRSGDSTGSGYKISSWKKFPSHIEKKSEYKGQDAEDLPSKEEQDQVHVKEENVENVDTDSSNPEQSELSSRAQKVHWGFWGDPHNLTYENSMICRICEVEIPIVYVEEHSQICTIADRCDLKGLNVNERLERFAETIEKIIESWTPRSTPKSTPKSTPKSTDGPGESFENARVSTSSLHDEFNDLSLVRNSLSRRGSEDMLDSVPEADNTFIKDDLNLLPKRSCEKYFKHDQCSKMSSVGSLTPRSPLLTPRTSQIEMLLSGRRTILELESYFQINKLVEIARSVANVNDYRSLNYVSRRVEELNLTIQDRKVDALIVETFGRRIETLLSEKYLSLCDQLDNEKVDSSNGLVEEESSVEDDTIRSLRASPIHHCSRDRTSIEDFEIIKPISRGAFGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRENLYLVMEFLNGGDLYSLLRNLGCLDEDMARVYIAEVVLALEYLHSLHVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLIHSTDDLSTSSFSTDDLVGNDEPKKDRSSKVEQRQKQSVVGTPDYLAPEILLGMGHGATADWWSVGIILYELLVGIPPFNAEHPHQIFDKIINRDIQWPNVPEEMSYEACDLIDK 1037
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci475g0001 1037 PANTHER SERINE/THREONINE-PROTEIN KINASE 460 1037 - -
Prci475g0001 1037 ProSitePatterns Serine/Threonine protein kinases active-site signature. 892 904 IPR008271 GO:0004672|GO:0006468
Prci475g0001 1037 SMART serkin_6 773 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci475g0001 1037 MobiDBLite consensus disorder prediction 354 400 - -
Prci475g0001 1037 MobiDBLite consensus disorder prediction 533 564 - -
Prci475g0001 1037 MobiDBLite consensus disorder prediction 414 459 - -
Prci475g0001 1037 Pfam Protein kinase domain 773 1036 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci475g0001 1037 CDD STKc_MAST_like 779 1037 - -
Prci475g0001 1037 SUPERFAMILY Protein kinase-like (PK-like) 770 1036 IPR011009 -
Prci475g0001 1037 MobiDBLite consensus disorder prediction 51 72 - -
Prci475g0001 1037 MobiDBLite consensus disorder prediction 940 955 - -
Prci475g0001 1037 MobiDBLite consensus disorder prediction 1 74 - -
Prci475g0001 1037 FunFam probable serine/threonine protein kinase IREH1 771 860 - -
Prci475g0001 1037 Gene3D Transferase(Phosphotransferase) domain 1 857 1036 - -
Prci475g0001 1037 MobiDBLite consensus disorder prediction 932 961 - -
Prci475g0001 1037 ProSiteProfiles Protein kinase domain profile. 773 1037 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci475g0001 1037 Coils Coil 52 72 - -
Prci475g0001 1037 FunFam Probable serine/threonine-protein kinase cot-1 856 1037 - -
Prci475g0001 1037 MobiDBLite consensus disorder prediction 414 445 - -
Prci475g0001 1037 MobiDBLite consensus disorder prediction 368 400 - -
Prci475g0001 1037 Gene3D Phosphorylase Kinase; domain 1 771 856 - -
Prci475g0001 1037 MobiDBLite consensus disorder prediction 1 40 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci475g0001 38 1037 AGC Kinase Gene Family AT5G62310 59.073 0.0 1140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Prci475g0001 Pkinase 1.4e-58 CL0016