Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci469g0002 ATGGACACAAGTATGACTCCAATAGTTGGTCTTGAATTTGATGATCTAGAAGAGGCATGGCAATATTGGATTGACTATGGTGGAAGAATAGGATTCAGTGTTAGAAAGCAAAACTCTAATAAGAGCAAGAAGGATGATTCTATCATATATTGCAAATATGTTTGTTCCAAGGAGGGAGTGAAAAAAGCAGATAAAAGAGACTTTAAAACTAAGAAGCCTCGAAAGGAAACAAGAACAGGGTGTGAAGTGAAAATGATAATTAAAAAGGTGAATGAAAGATTTAGAGTTAGTGAACTATTTTTGGACCATAATCACCCTTTAGAGCCCCCAGAGACTATTCATTTATTAGCATCACAAAGGAGATTACCGAAAGCACAAGGCTATGCTTTGGAGTTTGCTGAAGATACGGGGATTAAGCAAAAAGCCTCTTTTAATTTAATGAGCAAATATGCAAGAGGGAGGGCTAATTTGGGGTATACCAAAGAGGAGGTAAAGAGTTATCTAAGATCAAGGAGGCAACGAGACATGATCTATGGTGAAGCTGGGTTTTTACTTCGCTATTTTCAACAACAATTGACAGAAAATCCTTCATTTTTTCATGCTTATCAAATGGACTCAGAAGAGCAGATAACTAATGTGTTTTGGGCTGATGCACGTATGTTGATAGATTATGATTGTTTTGGGGATGTCATTTCATTTGATACAACATACTCTACAAATCGTGACAACAGACCACTTGCCATTTTCTCAGGTTTCAACCATTACAGAGAAGTAGTGATATTTGGTGCTGCTTTATTATATGATGAGACTATTGAGTCTTTTAAATGGCTTTTTGAAACCTTTTTACAAGCACATAAGCAAAAAATGCCATTTACTATGTTTACTGACCAAGATGCAGCAATGGCAAGAGCCTTAGAAGAAATAATGCCAAATGTAAAGCATGGCTTATGCACATTCCACATCAATAGAAATGGGGTGAAACATCTTGGAAACTTAATGAAAGATGGCTCTCGTTTTCTGGGTGAGTTTAATTGGTGCATGTATCATTGCAAGGAAGAAACAAGGTTTGAGGAATCTTGGAAAGAATTATTATCAAAATATAATGTAGAAGAAAATCCATGGTTGATGTCTATTTACAAGTTAAAAGAAAAATGGGCAGCATGTTACATGAAGTACTCAAAGACTCTTGGTATGAGAAGTACACAACTTAGTGAAAGTATCAATTCATTTATAAAAAGTTGCACTAATCCTGAATTGAATATTAGTCAATTCTTCAATGTCTTTGAACAAGTTGTTGTGGATAAGCGGTATAATGAATTGCAAAGTGACTTCAACTCACGCCAGAAGTTGCCAAGGTTGATATTGAAGAGTTCGTCTATGCTGCAACAGCTTTCTCAAGTTTACACACCACCAATTTTTGACTTGTTCCAGCATGAGTATGACTTACGTGATGCTACGTGTATAAAAGAGAGGAAAGAAAGAAAAATAGCTGCAGATGATGATGCTCTTGTTATTGATTATGTAATCACAATGGTTGATAAAAAAGGAGAGTGGAGATTGACATTTGAGCCATCAAGAGAAGATAAAGAGGCTGTCATTACTTGTAATTGTAAGAAGTTTGAACAATGGGGAATATTATGCTGTCATGCATTGAGGATATTGTATGACCAAGATGTAAAGCTACTTCCAAAGCAATATGTGTTAAAGAGGTGGACAAAAGAAGCAAGGTGTGGTGTAGTGCATGATAGTAAGGGAAAGGAAATTGAAGTTGATCCTAAACTAGAATGCTCGAATCGATATAGGCAATTGTGCCCCATGCTCATAAAATTAGCTAGTGATGCATCTGAATGTTCAGAGGCATTCTCTATGGTTCATCAAGCAGTGCTAGAGCTTAGCAAGAAAGTGTCTCAACTTCTTATTAACCACTCATCAGATAGTGTTAATAATGAAGGAGGTGTTGATGATGATGTTGGTAAGAATGATGGTTCAGGCATTGGATTCAAGAAGAGAGAGCGCAAAAAGATTAGTCCAAGTTGGGACACACAAAATATATTAGAAGTGGGTAGATCATCATCTTCGGTACAATATGGCTCCCTTGTGTCAAATATGCCAGTGCAAGTGCAAAATGACCCCCCTGTGTCAAATATGCCGGTGCAAGTGCAATGTGGCCCCCCTGTGTCAAATATGCCGGTGCAAGTGCAATGTGGCCCCCCTGTGTCAAATATGCCGGTGCAAGTACAATGTGGCCCCCCTGTGTCAAATATGCCGGTGCAAGTGCAATGTGGCCCCATTGTGTCAAATATACCGGTGCAAGTGCAAACTGGCCCCCTTGTGCCAAGTATGTCGGTGCAAGTGCAAAATGGCCCCCTCGTACCAAGTATGCCTGTGCAAATGCTATATGGTCCTCCCGTGTCAAGTATGCTAGTGCAAGGGCAATATGGCCCCACCGTGTCAAGGATGCCGGTACAAGGGCAATATGGCCCCACCGTGTCAAGGATGCCGGTACAAGGGCAATATAGCCCCCCCGTGTTAGGTATGCTAGTGCAAGGGCAATATGGTCTGCCTGTGCCAAATACACCAATAACAACACAACATGATCCACTTCAAGATTCATTGAACAACAATGTGAAGTCACTTGAAGCAATTGAATTTAGTCAAGTATTTGAGAAAGATTCAAATCTGAATGTGAATACAAATCCTCAGTTGTGA 2709 0.392 MDTSMTPIVGLEFDDLEEAWQYWIDYGGRIGFSVRKQNSNKSKKDDSIIYCKYVCSKEGVKKADKRDFKTKKPRKETRTGCEVKMIIKKVNERFRVSELFLDHNHPLEPPETIHLLASQRRLPKAQGYALEFAEDTGIKQKASFNLMSKYARGRANLGYTKEEVKSYLRSRRQRDMIYGEAGFLLRYFQQQLTENPSFFHAYQMDSEEQITNVFWADARMLIDYDCFGDVISFDTTYSTNRDNRPLAIFSGFNHYREVVIFGAALLYDETIESFKWLFETFLQAHKQKMPFTMFTDQDAAMARALEEIMPNVKHGLCTFHINRNGVKHLGNLMKDGSRFLGEFNWCMYHCKEETRFEESWKELLSKYNVEENPWLMSIYKLKEKWAACYMKYSKTLGMRSTQLSESINSFIKSCTNPELNISQFFNVFEQVVVDKRYNELQSDFNSRQKLPRLILKSSSMLQQLSQVYTPPIFDLFQHEYDLRDATCIKERKERKIAADDDALVIDYVITMVDKKGEWRLTFEPSREDKEAVITCNCKKFEQWGILCCHALRILYDQDVKLLPKQYVLKRWTKEARCGVVHDSKGKEIEVDPKLECSNRYRQLCPMLIKLASDASECSEAFSMVHQAVLELSKKVSQLLINHSSDSVNNEGGVDDDVGKNDGSGIGFKKRERKKISPSWDTQNILEVGRSSSSVQYGSLVSNMPVQVQNDPPVSNMPVQVQCGPPVSNMPVQVQCGPPVSNMPVQVQCGPPVSNMPVQVQCGPIVSNIPVQVQTGPLVPSMSVQVQNGPLVPSMPVQMLYGPPVSSMLVQGQYGPTVSRMPVQGQYGPTVSRMPVQGQYSPPVLGMLVQGQYGLPVPNTPITTQHDPLQDSLNNNVKSLEAIEFSQVFEKDSNLNVNTNPQL 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci469g0002 902 SMART 26again6 533 560 IPR006564 GO:0008270
Prci469g0002 902 Pfam SWIM zinc finger 515 555 IPR007527 GO:0008270
Prci469g0002 902 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 636 IPR031052 GO:0006355
Prci469g0002 902 Pfam MULE transposase domain 230 324 IPR018289 -
Prci469g0002 902 ProSiteProfiles Zinc finger SWIM-type profile. 520 558 IPR007527 GO:0008270
Prci469g0002 902 Pfam FAR1 DNA-binding domain 22 108 IPR004330 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci469g0002 MULE 4.3e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci469g0002 - - pcin:129316824 1777.3