Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci468g0004 ATGGCTTTTCCTTGGCCTCTCTCCTTCTCTGTTCAACTGCTCTTTGTTTACACTTTCTCATTGCATGCACTATCTGCAACGGTCACACAACGGGTGGGACCCACCGGTAATCGTGTGATCACCGTCGATGTCAACGGAGGAGGGAACTTCCGGTCGGTCCAAGCCGCCGTTGATGCTGTCCCAGACAACAATAGAGTGAACGTCACTATTCAAATCAGCGCCGGATACTACATAGAGAAAGTGGTCGTGCCGGCGACCAAGCCGTACATTACGTTTCAAGGAGCTGGGAGGGAGAAGACGGTGATAGAATGGCATGATCGAGCCAGTGATCTCGGACCCAGTGGACAACAATTACGTACTTACAGAACAGCTTCTGTGACTGTTTTTGCCAACTTTTTCTCTGCGAGGAACATCAGCTTCAAGAATACAGCGCCGGCACCGATGCCGGGAATGGAGGGGTGGCAAGCGGCGTCTTTAGGATATCAGGGGACAAAGCGTACATGTTGGGATGTG 513 0.5166 MAFPWPLSFSVQLLFVYTFSLHALSATVTQRVGPTGNRVITVDVNGGGNFRSVQAAVDAVPDNNRVNVTIQISAGYYIEKVVVPATKPYITFQGAGREKTVIEWHDRASDLGPSGQQLRTYRTASVTVFANFFSARNISFKNTAPAPMPGMEGWQAASLGYQGTKRTCWDV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci468g0004 171 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 33 167 - -
Prci468g0004 171 SUPERFAMILY Pectin lyase-like 36 163 IPR011050 -
Prci468g0004 171 Gene3D - 17 170 IPR012334 -
Prci468g0004 171 Pfam Pectinesterase 40 145 IPR000070 GO:0030599|GO:0042545
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci468g0004 9 165 Carbohydrate Esterase AT5G47500 58.857 3.92e-65 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci468g0004 - - pcin:129297232 350.132