Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci461g0001 ATGGCGAAACTATCACAACCGAAGAATAATGCTGTCATCAGCAACAACAACCTCAGCGTCACTAACACTACGGTGCCCACCAAGGTTAAACGCACAAGGAGAAGTGTCCCCAGAGACTCTCCTCCTCAACGTAGCTCTATATACCGAGGAGTCACTAGGCACCGGTGGACTGGCCGGTATGAAGCTCACTTGTGGGACAAGAATTGTTGGAACGCGTCACAGAACAAAAAAGGGAGACAAGTATATCTGGGTGCTTATGACGATGAAGAAGCAGCAGCACATGCCTATGACCTAGCAGCATTGAAGTACTGGGGTCAAGATACAATTCTTAACTTTCCGTGGTCGACATACCTGAACGAACTGAAGGGAATGGAGGGTCAATCGAGGGAAGAGTATATTGGATCATTGAGGAGGAAAAGCAGTGGTTTTTCCCGGGGAGTTTCTAAATACAGAGGCGTTGCCAGACATCATCATAATGGAAGATGGGAAGCTCGGATTGGCAGAGTTTTTGGCAATAAATATCTCTATCTTGGGACTTATGCGACTCAAGAAGAAGCTGCCACGGCTTATGATATGGCGGCTATAGAATACCGTGGACTTAACGCCGTCACCAACTTCGATCTCAGCCGTTATATAAAGTGGCTTAAGCCTAATTCCATCGGCACCAATATTATTAATCCTAGTGATCAGTCTAACTCTGACCCTAACGGTAATGTCATTACCACCTTAACGACATCAAACCCTACTCAAGAGCATTGGTTCAGCTTCTTCCATCACAACCGCCAGCTTCAGGAACCGCCAGCTATTTATAACGGCGAACAAGAAGCCAAGCTGACTCATCGCCGACTGTCTCCGACAACCACTGCCACGTCAGCCCTAAGGCTTCTGCTTCAGTCGTCCAAGTTCAAGGAAATGATGGAGATGACATCCTCCGAGGATTTGTCGGTTCCTCCAGCTGCGAAGGTGCCGCTGCAATGCAGGTTTCCGGATGATATTCAGACGTACTTTGAGTGCGAGGACTTCAACAGTAATGGGGAAGGGGATGATCATATCATGTTCAGCGAGCTCAACTCCTACGTGCCTCCTCTGTTGTATGGTGACTTTGAAACCTGA 1113 0.4771 MAKLSQPKNNAVISNNNLSVTNTTVPTKVKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNASQNKKGRQVYLGAYDDEEAAAHAYDLAALKYWGQDTILNFPWSTYLNELKGMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDMAAIEYRGLNAVTNFDLSRYIKWLKPNSIGTNIINPSDQSNSDPNGNVITTLTTSNPTQEHWFSFFHHNRQLQEPPAIYNGEQEAKLTHRRLSPTTTATSALRLLLQSSKFKEMMEMTSSEDLSVPPAAKVPLQCRFPDDIQTYFECEDFNSNGEGDDHIMFSELNSYVPPLLYGDFET 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci461g0001 370 SUPERFAMILY DNA-binding domain 46 115 IPR016177 GO:0003677
Prci461g0001 370 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 273 - -
Prci461g0001 370 Gene3D AP2/ERF domain 148 209 IPR036955 GO:0003700|GO:0006355
Prci461g0001 370 Gene3D AP2/ERF domain 47 114 IPR036955 GO:0003700|GO:0006355
Prci461g0001 370 ProSiteProfiles AP2/ERF domain profile. 149 207 IPR001471 GO:0003700|GO:0006355
Prci461g0001 370 PRINTS Ethylene responsive element binding protein signature 189 209 IPR001471 GO:0003700|GO:0006355
Prci461g0001 370 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Prci461g0001 370 SUPERFAMILY DNA-binding domain 148 209 IPR016177 GO:0003677
Prci461g0001 370 MobiDBLite consensus disorder prediction 1 46 - -
Prci461g0001 370 CDD AP2 46 115 IPR001471 GO:0003700|GO:0006355
Prci461g0001 370 ProSiteProfiles AP2/ERF domain profile. 47 113 IPR001471 GO:0003700|GO:0006355
Prci461g0001 370 FunFam AP2-like ethylene-responsive transcription factor 46 115 - -
Prci461g0001 370 SMART rav1_2 47 119 IPR001471 GO:0003700|GO:0006355
Prci461g0001 370 SMART rav1_2 149 213 IPR001471 GO:0003700|GO:0006355
Prci461g0001 370 Pfam AP2 domain 47 105 IPR001471 GO:0003700|GO:0006355
Prci461g0001 370 Pfam AP2 domain 148 199 IPR001471 GO:0003700|GO:0006355
Prci461g0001 370 CDD AP2 148 209 IPR001471 GO:0003700|GO:0006355
Prci461g0001 370 FunFam AP2-like ethylene-responsive transcription factor 148 209 - -
Prci461g0001 370 MobiDBLite consensus disorder prediction 1 30 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci461g0001 43 268 AP2-EREBP Transcription Factor Family AT5G57390 57.261 1.55e-87 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Prci461g0001 AP2 3.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci461g0001 K09285 - gmx:100804555 486.493