Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci457g0007 ATGATGGATGTTGCAGAGGTTGAAGAAAATATGTTTGCAGCAAGTGATGCCAAGTTACATGGAGAATTGTGCAAGTCTCTTTCGGCAACATATTGCAAATTATTGTCAATATTTCCAACTTTGGAAGAAGCTAGGCCCAGGAGCAAATCTGGGATCCAGGCACTATGTTCATTGCATGTGGCATTAGAGAAGGCCAAGAATGTTCTTCAACATTGCTCGGAGTGTAGCAAGCTTTATTTGGCTATAACAGGGGATTCTGTTCTTCTAAAATTTGAGAAAGCTAAATGTGCTCTTGAAAATAGTCTTAAACGGGTGGAAGATATCGTTCCACAATCTATTGGATGTCAGATTCAAGAGATTGTGAGTGAACTTGAAAGCATGGAATTGGCACTTGACCCAGTGGAGACAATTGGTGATAATTTAATTGCTTTGCTCCAGCAGGGGAGAAAGTTTAACGACTCTACTGATAATAGTGAGCTTGAATGTTTTCACCAAGCTGCTATTAGATTAGGAATCACATCTTCTAGAGCAGCTCTTACTGAAAGAAGAGCTCTCAAGAAGCATATTGAAAGAGCTCGGGCTGAGGATGACAAGCGGAAGGAATCAATTGTTGCATATCTTCTACACCTCATGAGGAAATACTCTAAGTTATTTAGAAGCGAGTTTTCAGACGATAATGATTCTCAGGGTTCCACTCCTTGTTCTCCCACTGTTATGGGCTCTATGGAGGATAGTGTTGCTTGTAGTCATTACCAGGCTTTTGACCGACAGCTCTCAAAACTTAGTTCTTTTAATTTTAAGCCACATAATAGAAAATCATGGCAAATGGCCCTTACACCAGAGGAGTTAAGGTGTCCAATATCCCTGCAACTTATGTATGATCCTGTCATAATTGCTTCTGGGCAAACTTATGAGAGGGTTTGCATAGAGAAATGGTTCTGTGATGGGCACAACACCTGCCCGAAGACTCAACAGAAACTTGCACATCTATCATTGACTCCAAATTACTGTGCCAAGGGTCTGGTTGCTAGTTGGTGTGAACAAAATGGAGTGCCCATTCCTGATGGCCCTCCCGAATCTCTTGACTTTAACTACTGGAGATTAGCATTATCTGAGTCTGAATCAACCAATTCGAGGTCTGTTAACAGTGTCAACTCTTGCAAATTGAAGGGTGTCAAAGTGGTTCCTTTAGAAGAGACTGGGGTCTCGCATGAGACTGGAGAAAATGGATCTGAAAGTGTGTCTGCACAAGAGGAAGATACTGAGCAGTATCTTAGTTTTCTGAAAGTCTTGACTGATGGGAACAGCTGGAAAGGGAAATGCAAAGTGGTCGAAAGGTTAAGGCTTTTGCTGAGGGATGATGAAGAAGCCAGGATTTTTATGGGGGCGAATGGGTTTGTTGAAGCACTACTGCAGTTTCTGCAATCAGCAGTGTCCGAAGGGAATGTGACAGCTCAAGAAAGTGGAGCAATGGCTCTCTTTAACCTTGCTGTGAATAACAACAGAAATAAGGAGATTATGTTAGCAGGAGGAGTATTATCGTTGCTAGAGGAAATGATCGCTAATTCCAACTCTTATGGCTCTGCAACGGCCCTCTATCTGAATCTCTCTTGCCTTGAAGAAGCCAAGCCTACGATTGGCACGAGTCAGGCTGTCCAGTTCCTTATCCAGCTCCTCTGTCAACCTGACATTGAAGTCCAGTGCAAGCAAGATTCCCTTCATGCGCTGTATAATCTATCCACTGTTCCCTCCAACATTCCAAACCTCATTTCATCTGGCATCATTAGTGGCCTTCAATCCCTCGTTGCAGGCCAGGGTGATTGGATGGGGACAGAAAAATGCATAGCTATTTTGATCAATTTGGCTTCTTCTCAGTTGGGAAGGGAGGAAATGATATCATTTCCAGGACTCATAGGCGCGTTGGCTTCCATATTAGATACTGGGGAGCTCGTAGAGCAAGAGCAAGCTCTATCTTGTCTATTAATTTTATGTAACGGGAATGAAACATGTAGCCAGATGGTCCTGCAAGAAGGCGTAATACCTGCATTGGTGTCATTATCAGTGAATGGTACCTCAAGAGGAAGAGAGAGAGCTCAGAAACTCTTGATGCTGTTCAGAGAGCAACGACAGCGAGACATTTCCCCTCCCAAGACTGACCAGTTCCCGCCTGAACCTGAAACTAGTGATATAGAGATGCCGCCTCCCGAAACAAAACCGCAATGTAAGTCAATGTCTAGAAAAAAAATGGGGAGGGCGCTTAGCTTTTTATGGAAAACCAAGAGCTATTCTGTTTACCAGTGTTAG 2304 0.4323 MMDVAEVEENMFAASDAKLHGELCKSLSATYCKLLSIFPTLEEARPRSKSGIQALCSLHVALEKAKNVLQHCSECSKLYLAITGDSVLLKFEKAKCALENSLKRVEDIVPQSIGCQIQEIVSELESMELALDPVEKXIGDNLIALLQQGRKFNDSTDNSELECFHQAAIRLGITSSRAALTERRALKKHIERARAEDDKRKESIVAYLLHLMRKYSKLFRSEFSDDNDSQGSTPCSPTVMGSMEDSVACSHYQAFDRQLSKLSSFNFKPHNRKSWQMALTPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFCDGHNTCPKTQQKLAHLSLTPNYCAKGLVASWCEQNGVPIPDGPPESLDFNYWRLALSESESTNSRSVNSVNSCKLKGVKVVPLEETGVSHETGENGSESVSAQEEDTEQYLSFLKVLTDGNSWKGKCKVVERLRLLLRDDEEARIFMGANGFVEALLQFLQSAVSEGNVTAQESGAMALFNLAVNNNRNKEIMLAGGVLSLLEEMIANSNSYGSATALYLNLSCLEEAKPTIGTSQAVQFLIQLLCQPDIEVQCKQDSLHALYNLSTVPSNIPNLISSGIISGLQSLVAGQGDWMGTEKCIAILINLASSQLGREEMISFPGLIGALASILDTGELVEQEQALSCLLILCNGNETCSQMVLQEGVIPALVSLSVNGTSRGRERAQKLLMLFREQRQRDISPPKTDQFPPEPETSDIEMPPPETKPQCKSMSRKKMGRALSFLWKTKSYSVYQC 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci457g0007 768 SUPERFAMILY ARM repeat 428 706 IPR016024 -
Prci457g0007 768 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 353 IPR013083 -
Prci457g0007 768 PANTHER U BOX DOMAIN-CONTAINING 22 709 - -
Prci457g0007 768 SMART Ubox_2 283 346 IPR003613 GO:0004842|GO:0016567
Prci457g0007 768 SUPERFAMILY RING/U-box 278 356 - -
Prci457g0007 768 Gene3D - 426 606 IPR011989 -
Prci457g0007 768 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 466 512 IPR000225 GO:0005515
Prci457g0007 768 MobiDBLite consensus disorder prediction 719 733 - -
Prci457g0007 768 Coils Coil 176 196 - -
Prci457g0007 768 FunFam RING-type E3 ubiquitin transferase 279 353 - -
Prci457g0007 768 MobiDBLite consensus disorder prediction 713 745 - -
Prci457g0007 768 ProSiteProfiles U-box domain profile. 279 353 IPR003613 GO:0004842|GO:0016567
Prci457g0007 768 Gene3D - 607 712 IPR011989 -
Prci457g0007 768 Pfam U-box domain 281 350 IPR003613 GO:0004842|GO:0016567
Prci457g0007 768 CDD RING-Ubox_PUB 281 333 IPR045210 -
Prci457g0007 768 SMART arm_5 540 582 IPR000225 GO:0005515
Prci457g0007 768 SMART arm_5 455 499 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci457g0007 2 767 U-box Gene Family AT1G24330 66.110 0.0 1032
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci457g0007 - - gmx:100794099 1181.78