Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci456g0001 ATGGAGTTTAGCCTTGAAAACAAGGACAAGTCTGAGAGAATAAGGTGGGGATATTCAGAGGAAGCAACACAAGTTAGATCCTATACGTGTGGATTCTGTCAGAAAGGATTTTCAAATGCACAAGCTCTTGGTGGTCACATGAACATTCATAGAAGAGACAGAGCGAGGCTGAGGCAACAATATTGTCAAGAGAATATTTGGCTGTCTCTTGACACTACGAACGGCGGTAATGATCTTTGTCACGATCAGCACCAGAACTCTGATTATAATATTCACAAAATGCCATCAATTTTCCCAGAGGCAAAGGTAAACATTGGTATTTCTTCAGAAATTTGTCAGCTTCCTATTTTGTTCGGCTTTGAAGAGAAGAAGATGGAGTTAGACCTTGAGCTTCGTTTAGGTCGTGAGCCCGTAAAGCAGACCACTCCCACTCTGAGACGATTCTTTTAA 450 0.4156 MEFSLENKDKSERIRWGYSEEATQVRSYTCGFCQKGFSNAQALGGHMNIHRRDRARLRQQYCQENIWLSLDTTNGGNDLCHDQHQNSDYNIHKMPSIFPEAKVNIGISSEICQLPILFGFEEKKMELDLELRLGREPVKQTTPTLRRFF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci456g0001 149 Gene3D Classic Zinc Finger 6 87 - -
Prci456g0001 149 ProSiteProfiles Zinc finger C2H2 type domain profile. 28 55 IPR013087 -
Prci456g0001 149 PANTHER OS07G0101800 PROTEIN 13 90 - -
Prci456g0001 149 ProSitePatterns Zinc finger C2H2 type domain signature. 30 50 IPR013087 -
Prci456g0001 149 SUPERFAMILY beta-beta-alpha zinc fingers 25 55 IPR036236 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci456g0001 17 142 C2H2 Transcription Factor Family AT3G09290 38.514 1.49e-21 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Prci456g0001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci456g0001 - - pcin:129297188 314.309