Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci450g0010 ATGCCATCGCTTGAGCCATGTTTCTCCGATCAATCTCCGGAAAGTACAGAGTTGGATGATACCTATGGGAATTCTGATGTTCTTAAGGAACCTGGGTCAAGAAAACGCCTAAGGTCAGGACCCAGCAATTCATCTGGAACCAAAGCATGTAGAGAGAAATTGAGGAGGGATCGACTGAATGACAGGTTCCTAGAATTGGGTTCTATCCTTGATCCTGGCAGGCCTGCCAAAGACAAGGTTGTCATATTAAGCGATGCAGTTCGAGTGCTCTCTCAGCTAAGAGACGAGGCTCTGAAGCTTAGAGAGTCCAATGAGAATCTGCAGAAGAAAATAAATGAATTGAAGGCTGAGAAAAATGAGCTCCGCGATGAGAAGCAGCAGCTAAAATTGGAGAAAGATAACATTGAGCGGCAAGTCAAAGCCTTGAATTCACAACCAAGCTTCCTGCCTCACCCTCCCACCCTCACAGCTCCATTTCCAACACCAGGACCAGTTCTTGGGGGCAAGATGGTGCCATTCATTCGTTACCCAGGAGTTTCAATGTGGCAGTTCTTACCCCCTGCTGCTGTTGACACCTCACAGGACCATCTACTTCGTCCCCCAGTCGCCTAA 612 0.4788 MPSLEPCFSDQSPESTELDDTYGNSDVLKEPGSRKRLRSGPSNSSGTKACREKLRRDRLNDRFLELGSILDPGRPAKDKVVILSDAVRVLSQLRDEALKLRESNENLQKKINELKAEKNELRDEKQQLKLEKDNIERQVKALNSQPSFLPHPPTLTAPFPTPGPVLGGKMVPFIRYPGVSMWQFLPPAAVDTSQDHLLRPPVA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci450g0010 203 Coils Coil 90 145 - -
Prci450g0010 203 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 93 IPR011598 GO:0046983
Prci450g0010 203 SMART finulus 49 99 IPR011598 GO:0046983
Prci450g0010 203 MobiDBLite consensus disorder prediction 1 54 - -
Prci450g0010 203 MobiDBLite consensus disorder prediction 1 22 - -
Prci450g0010 203 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 47 113 IPR036638 GO:0046983
Prci450g0010 203 Gene3D - 44 123 IPR036638 GO:0046983
Prci450g0010 203 Pfam Helix-loop-helix DNA-binding domain 47 93 IPR011598 GO:0046983
Prci450g0010 203 CDD bHLH_AtILR3_like 48 122 - -
Prci450g0010 203 PANTHER BHLH TRANSCRIPTION FACTOR 11 203 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci450g0010 12 203 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 61.538 1.43e-80 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci450g0010 HLH 2.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci450g0010 - - tcc:18597043 300.056