Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci442g0002 ATGGCTCGTCAACCCAATATTATTATTCCCCGGCGTGATCATCATCATCAACAACAACAACAACAACAACAACAAGAGACTGTGATCGAGATCAAGAGATCCGTGAACTTCACAGGAGGGCTCGAGTTCTCAGGCCTGACCTACACAGTGACGAAGAAGAAGAAGGCTGATAGCAGCTGGGTGAAGGAGAACGTGGACTTGCTTCATAGCATTACTGGGTACGCCCCAAAGGGTTGTGTCACTGCAGTGATGGGTCCTAGTGGTGCAGGCAAGTCCACCTTCTTGGATGGTCTCGCTGGCAGAATTGCGAGTGGGAGCCTCAAGGGAAGGGTGTGTTTGAATGGCACAGATACAAACCCTACGTTGATCAAGAGAACTTCTGCTTATATCATGCAGGAAGATAGGCTCTTCCCAATGCTCACTGTGTATGAAACTTTCATGTTTGCTGCTGATTTTCGATTAGGTTCTCTTTCTCTTGCTGACAAGAAGCAGAGAGTAGAGAAGCTCATTGAGCAGCTTGGCTTATCATCAACTCGAAACACGTACATCGGAGACGAAGGAACAAGAGGAGTGTCTGGCGGAGAGAGACGTCGAGTGTCCATCGGCGTCGACATCATCCACGGACCATCCCTTCTGTTTCTCGACGAGCCCACTTCCGGTCTGGACTCCACCAGCGCTCACAGCGTCATCGAGAAAGTCCACGACATCGCTCGAGGCGGCAGCACTGTCATCCTCACCATCCACCAGCCTTCCTCCAGAATCCAGCTCCTTCTCGACCACCTCATCATCCTTGCCAGAGGCCAACTCATGTTTCAGGGTTCCCCCAAAGACGTCGCTCTCCATCTGGGTCGCATGGGACGCAAAATCCCCAAGGGAGAGAATCCAATTGAGCACCTCATTGATGTGGTTCAAGAGTATGATCAGTCTGAGGTCGGTGTCGGAGCTCTCGCTGAGTTCGCCCGCACCGGAGTGAAACCCCCTCCGTTGTCTGACCAGGAATTCTCCCTCTCCACCGTCGCACAGTTAACCCCCGGTCGAAACCCTCGCCACGAGGACCGTTCCATGGTCGATGAGTTTGATCACAGTCTGAGAAGCTCCCATACACCCAAGTCCTGGAATACCGGCAATAGTGGATTGTTTCAAAAGCTTACACCTTCCCGCTTTAAGAATGAACATAGACTGCAGAATAATCCTTTACGTAATGCTTCGCCTGGGTACTATACGTACTCGAACGAGATCCTCCCAGCAACACCAACTCCACATAGCAGTGACTACACAGTGAATGAGAACGACTATATGACTCCTCCGGATGGCATGCCAAAGCATCTGGGTCCGAAATTTGCGAACTCTTTCATGGCGGAGACATGGATTCTGATGAGGCGGAACTTCATAAACATCCGCAGAACACCTGAGCTTTTTCTCTCCAGATTGATGGTGCTCACGGTGATGGGCGTCATGATGGCCACCATGTTCAGGAACCCTAAAGAAAACGCGCAAGGAATCACCAACCGCCTCAGCTTCTTCATCTTCACTGTCTGTCTCTTCTTCTTCTCCTCCAACGACGCCGTGCCGGCATTCATCCAAGAACGATTCATTTTCATCAGAGAAACTTCCCACAATGCCTATCGAGCTTCCTCCTACACCATCGCCGGCATAATCACCCACACGCCTTTTCTTGTTCTGCAAGCTTCCGTCTACGCCATCATCGTCTGGTTTGCTTTGAAGCTGCAAGGCCCTTTTCTGTACTTCGTGCTGGTTCTCTTCGTTTCTCTCCTCTCCACAAACTCGTTTGTTGTTTTTGTGAGCTCGGTGGTCCCGAACTACATACTTGGTTATGCTGCTGTTATCGCTTTCACTGCTTTATTCTTCTTGTTCTGTGGCTACTTCTTGAGCAGCAAGGATATTCCTATCTATTGGCGTTGGATGAACAAGATTTCGACCATGACTTATCCTTATGAGGGGCTTTTGATCAACCAGTATCGGAACTCAGATGTGTTTGGATCAAGCCTGGACGGGATAGATATTACAGGTTTTGATATCTTGAACAGTCTTCATATAAGTACTGATTCGTTTAGGAAGTGGGAAAATGTGATTATAATGTTGTTCTGGGCCGTCCTATATAGGATTTTGTTTTACTTGGTCCTTCGTTTTGCTTCTAAAAACCAGAGGTCGTAG 2175 0.4901 MARQPNIIIPRRDHHHQQQQQQQQQETVIEIKRSVNFTGGLEFSGLTYTVTKKKKADSSWVKENVDLLHSITGYAPKGCVTAVMGPSGAGKSTFLDGLAGRIASGSLKGRVCLNGTDTNPTLIKRTSAYIMQEDRLFPMLTVYETFMFAADFRLGSLSLADKKQRVEKLIEQLGLSSTRNTYIGDEGTRGVSGGERRRVSIGVDIIHGPSLLFLDEPTSGLDSTSAHSVIEKVHDIARGGSTVILTIHQPSSRIQLLLDHLIILARGQLMFQGSPKDVALHLGRMGRKIPKGENPIEHLIDVVQEYDQSEVGVGALAEFARTGVKPPPLSDQEFSLSTVAQLTPGRNPRHEDRSMVDEFDHSLRSSHTPKSWNTGNSGLFQKLTPSRFKNEHRLQNNPLRNASPGYYTYSNEILPATPTPHSSDYTVNENDYMTPPDGMPKHLGPKFANSFMAETWILMRRNFINIRRTPELFLSRLMVLTVMGVMMATMFRNPKENAQGITNRLSFFIFTVCLFFFSSNDAVPAFIQERFIFIRETSHNAYRASSYTIAGIITHTPFLVLQASVYAIIVWFALKLQGPFLYFVLVLFVSLLSTNSFVVFVSSVVPNYILGYAAVIAFTALFFLFCGYFLSSKDIPIYWRWMNKISTMTYPYEGLLINQYRNSDVFGSSLDGIDITGFDILNSLHISTDSFRKWENVIIMLFWAVLYRILFYLVLRFASKNQRS 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci442g0002 724 ProSitePatterns ABC transporters family signature. 191 205 IPR017871 GO:0005524|GO:0016887
Prci442g0002 724 MobiDBLite consensus disorder prediction 1 22 - -
Prci442g0002 724 Pfam ABC transporter 69 219 IPR003439 GO:0005524
Prci442g0002 724 Pfam ABC-2 type transporter 455 660 IPR013525 GO:0016020|GO:0140359
Prci442g0002 724 CDD ABCG_EPDR 41 273 - -
Prci442g0002 724 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 281 IPR027417 -
Prci442g0002 724 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 291 IPR003439 GO:0005524
Prci442g0002 724 SMART AAA_5 77 275 IPR003593 GO:0016887
Prci442g0002 724 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 712 - -
Prci442g0002 724 FunFam ABC transporter G family member 6 51 289 - -
Prci442g0002 724 Gene3D - 41 285 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci442g0002 36 373 Calmodulin-binding Proteins AT2G36910 24.709 3.50e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci442g0002 K05681 - gmx:100804809 1050.04