LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci438g0005	ATGATATCTTCTGGGGTTAACTTGGTGATGACTGTGATTGGATTTGCGATGAGCACTATGTTCATCGTTTTCGTTTGCACTAGACTTATATGTGCTCGAATTCACTTGAATGCTTCTCGCCGATCCCTCCTTATTGCTTCCAGATCCGATCTGAGTCTGCTGGAGCGGGGATTTCATGGTCTTGAACCCACATCAGTAGAGAACTTCCCAACGAAGAAGTACAGTGATGGATGCTTTGCTGCTGCAGAAAATTCTCAATGTACAGTTTGTCTCTCTGAATACCAAGGTCAGGATGTACTGCGCATCCTCCCATATTGTGGACACTTCTTCCATGCAACCTGCATAGACCTATGGCTGCAGCAGCATTCGACATGCCCTGTATGTCGAATCTCTTTACGCAAATCATCGGAGAGAAAGCGCGTAATGCAGCCATTATTTAGTGCCGTTGTTCAATCTAATTTTGGCGTGGAATCTATTCCCACTCATCCTTTTCACTGTATGATGGCTAATGATAATGAGTTATCATCAAGAAACCTGGACATGCATGGTGTGAACCCTGTACAAGAGGATCCCTGTACAAGAGGATCATTTTGCACCTGA	600	0.445	MISSGVNLVMTVIGFAMSTMFIVFVCTRLICARIHLNASRRSLLIASRSDLSLLERGFHGLEPTSVENFPTKKYSDGCFAAAENSQCTVCLSEYQGQDVLRILPYCGHFFHATCIDLWLQQHSTCPVCRISLRKSSERKRVMQPLFSAVVQSNFGVESIPTHPFHCMMANDNELSSRNLDMHGVNPVQEDPCTRGSFCT	199

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci438g0005	199	CDD	RING-H2_EL5-like	86	129	-	-
	Prci438g0005	199	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	54	135	IPR013083	-
	Prci438g0005	199	ProSiteProfiles	Zinc finger RING-type profile.	87	129	IPR001841	-
	Prci438g0005	199	PANTHER	OS11G0150450 PROTEIN	1	180	-	-
	Prci438g0005	199	FunFam	E3 ubiquitin-protein ligase ATL6	51	135	-	-
	Prci438g0005	199	SUPERFAMILY	RING/U-box	81	134	-	-
	Prci438g0005	199	SMART	ring_2	87	128	IPR001841	-
	Prci438g0005	199	Pfam	Ring finger domain	86	129	IPR001841	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci438g0005	6	132	Rapid Response to Elicitors	AT2G35000	34.328	6.32e-19	81.6

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci438g0005	-		-	pcin:129297129	405.216

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