Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci438g0005 ATGATATCTTCTGGGGTTAACTTGGTGATGACTGTGATTGGATTTGCGATGAGCACTATGTTCATCGTTTTCGTTTGCACTAGACTTATATGTGCTCGAATTCACTTGAATGCTTCTCGCCGATCCCTCCTTATTGCTTCCAGATCCGATCTGAGTCTGCTGGAGCGGGGATTTCATGGTCTTGAACCCACATCAGTAGAGAACTTCCCAACGAAGAAGTACAGTGATGGATGCTTTGCTGCTGCAGAAAATTCTCAATGTACAGTTTGTCTCTCTGAATACCAAGGTCAGGATGTACTGCGCATCCTCCCATATTGTGGACACTTCTTCCATGCAACCTGCATAGACCTATGGCTGCAGCAGCATTCGACATGCCCTGTATGTCGAATCTCTTTACGCAAATCATCGGAGAGAAAGCGCGTAATGCAGCCATTATTTAGTGCCGTTGTTCAATCTAATTTTGGCGTGGAATCTATTCCCACTCATCCTTTTCACTGTATGATGGCTAATGATAATGAGTTATCATCAAGAAACCTGGACATGCATGGTGTGAACCCTGTACAAGAGGATCCCTGTACAAGAGGATCATTTTGCACCTGA 600 0.445 MISSGVNLVMTVIGFAMSTMFIVFVCTRLICARIHLNASRRSLLIASRSDLSLLERGFHGLEPTSVENFPTKKYSDGCFAAAENSQCTVCLSEYQGQDVLRILPYCGHFFHATCIDLWLQQHSTCPVCRISLRKSSERKRVMQPLFSAVVQSNFGVESIPTHPFHCMMANDNELSSRNLDMHGVNPVQEDPCTRGSFCT 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci438g0005 199 CDD RING-H2_EL5-like 86 129 - -
Prci438g0005 199 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 135 IPR013083 -
Prci438g0005 199 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Prci438g0005 199 PANTHER OS11G0150450 PROTEIN 1 180 - -
Prci438g0005 199 FunFam E3 ubiquitin-protein ligase ATL6 51 135 - -
Prci438g0005 199 SUPERFAMILY RING/U-box 81 134 - -
Prci438g0005 199 SMART ring_2 87 128 IPR001841 -
Prci438g0005 199 Pfam Ring finger domain 86 129 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci438g0005 6 132 Rapid Response to Elicitors AT2G35000 34.328 6.32e-19 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci438g0005 - - pcin:129297129 405.216