Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci430g0004 ATGAAAACTGAGTTAAAAGGAAGCACTACTTCCATTTCCCTCCAATATCCAACTCTCTTCAACGCACCGCACAATAATCCTGATATCTCAGGAGCACTCAAAGGCTGCCTCGGGAGCCTCGATGGAGGTTGTATAGAGAAGCTCTTGCTTCACTGTGCCAGTGCTTTAGAGAGCAACGATGTAACTTTAGCTCAACAAGTCATGTGGGTGCTCAATAATGTCGCTTCTCCAGTTGGCGACACCAACCAAAGGCTCACCTCGTGGTTTCTCAGAGCCTTAATCTCTAGGGCTTCACGAGTCTGCCCCATGAACTTCAACGGGAGAAGCAGTACCATCCAGAGAAGGTTGATGTCCGTGACAGAGCTTGCAGGGTACGTTGATCTTATCCCTTGGCATAGGTTTGGGTTTTGTGCTTCCAATAGTGCTATTCTTAAAGCAATTCATGGATTCCAAAGAGTGCACATACTAGATTTTAGCATTACCCATTGTATGCAGTGGCCTACACTTATAGATGCCTTGGCCAAAAGGCCTGAAGGCCCTCCTGAGGTTAAAATCACAGTGCCTTCTTGTAGGCCATCTGTCCCACCTTTGGTCAATATTTCAATAGAAGAAGTTGGGCTGCGCCTGGGGAATTTTGCTAAGTTCAGGGAGGTCCTTTTTGAGTTTAATGTGATTCGAAGGAGCGCATCTTCTGAATTGAGCAATGTTAATAATGATTCATCCTGCTTTCCCTTTGAGTCATTGTTAAGTCACCTGAATCCCGCTACGTTAAATCTTAGGGAAGACGAAGCTTTGGTGATAAATTGTCAAAATTGGCTACGTTACTTGTCCGATGAAAGAAAGGAGAGTTTCCAAGATGCGTCCCCTAGGGATACTTTCATAAATCTAATTAAAAGTCTTAACCCTAGAATAGTACTATTGGTTGATGAGGATTGTGATCTTAGTGTCCCAAGTCTCACGTCAAGAATCACCACTTGTTTCAACTATTTGTGGATACCCTTTGATGCTTTGGAGACCTTTTTGCCTAAAGACAGCAACCACAGGGTAGAGTATGAATCTGACATAGGCCAGAAAATTGAGAACATCATCAGCTTCGAGGGGGTTCAGAGAATAGAGAGATTAGAAAGTGGGGCGAAAATGTCGCAAAGGATGAAAAACGGAGGCTTCTTCAACGTTCCATTTTGTGAAGAAACCGTGAGAGATGTTAAGGCTTTGCTTGATGAGCATGCTAGTGGATGGGGAATGAAGAGAGAAGAAGATATGTTGGTCCTCACATGGAAAGGCCATAACTCTGTAATCGCCACAGCTTGGGTCCCCAGTGAGTTAAGCGATCATATGGGTGTGGGCTGA 1350 0.4437 MKTELKGSTTSISLQYPTLFNAPHNNPDISGALKGCLGSLDGGCIEKLLLHCASALESNDVTLAQQVMWVLNNVASPVGDTNQRLTSWFLRALISRASRVCPMNFNGRSSTIQRRLMSVTELAGYVDLIPWHRFGFCASNSAILKAIHGFQRVHILDFSITHCMQWPTLIDALAKRPEGPPEVKITVPSCRPSVPPLVNISIEEVGLRLGNFAKFREVLFEFNVIRRSASSELSNVNNDSSCFPFESLLSHLNPATLNLREDEALVINCQNWLRYLSDERKESFQDASPRDTFINLIKSLNPRIVLLVDEDCDLSVPSLTSRITTCFNYLWIPFDALETFLPKDSNHRVEYESDIGQKIENIISFEGVQRIERLESGAKMSQRMKNGGFFNVPFCEETVRDVKALLDEHASGWGMKREEDMLVLTWKGHNSVIATAWVPSELSDHMGVG 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci430g0004 449 ProSiteProfiles GRAS family profile. 36 438 IPR005202 -
Prci430g0004 449 Pfam GRAS domain family 46 437 IPR005202 -
Prci430g0004 449 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 46 433 IPR005202 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci430g0004 17 439 GRAS Transcription Factor Family AT3G49950 46.651 1.42e-125 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Prci430g0004 GRAS 6.8e-89 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci430g0004 - - qsa:O6P43_000622 704.516