LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci428g0012	ATGGTTGCTGCTGTCAATCCTGTTGTTGGGTCCCATGTTTGGGTAGAGGATCCTGATGTGTCTTGGATTGATGGTGAGGTTTTGGATGTTAATGGAGAAGCAATCAAAGTCCTTTGCACTTCAGGGAAAACAGTGGTTGTTAAAGCTTCCAGTATTCATCCTAAAGATACTGAGGTGCCATCATGTGGAGTGGATGATATGACAAAGCTAGCTTACCTGCATGAACCTGGAGTCCTGGACAACCTGAGAATGAGATATGATATCAATGAAATTTATACTTACACTGGAAATATATTGATTGCTGTGAACCCTTTTACAAAGCTTCCTCATCTATATGATAGCCATATGATGGCACAATATAAAGGGGCAGCTTTTGGTGAGCTGAGTCCACATCCATTTGCAGTTGCAGATGCTGCATATAGGCTTATGGTTAATGAGGGAATCAGCCAATCAATATTGGTCAGTGGTGAAAGTGGGGCTGGTAAAACAGAGAGTACCAAATTACTAATGCGTTATCTTGCTTATATGGGAGGACGAGCAGCTGCTGAAGGTAGGACTGTTGAGCAGAAAGTCTTGGAGTCTAATCCTGTTTTAGAAGCCTTTGGCAATGCAAAGACTGTTAGGAACAATAATTCAAGTCGCTTTGGTAAATTCGTGGAGATTCAATTTGATCAGATGGGGAGAATTTCAGGAGCTGCCATAAGAACTTATCTTCTGGAAAGATCACGTGTCTGCCAGGTGTCAGATCCAGAGAGGAATTATCACTGTTTCTACATGCTCTGTGCTGCACCTCCTGAGGATGTTAAGAAGTACAAGTTGGGAAAGCCAGCAGCATTTCATTATCTAAATCAATCAAATTGCTATGAGATAGAAGGGCTTGATGAAGGTAAAGAATATATTGCCACAAGAAGAGCAATGGATGTTGTTGGAATGAGTTCTGAGGAGCAGGATGCAATATTTCGTGTGGTAGCTGCAATTTTGCATCTTGGAAACATTGAATTTGCCAAAGGGAAGGAAATAGACTCATCTATGCCCAAGGATGAAAAATCTATGTTCCATCTACAAACTGCTGCTGAGCTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAGCGTGTAATTGTTACTCGTGATGAAACCATCATAAAATGTTTGGATCCAGAAGCTGCTGCACTTAGCCGAGATGCTTTGGCTAAAATTGTTTACTCTAGGCTGTTTGATTGGCTGGTGGAGAAAATTAATAGTTCAATTGGTCAAGATCCTGATTCAAAGTCCCTAATTGGCGTGCTGGATATTTATGGGTTTGAGAGTTTCAAAAATAACAGTTTTGAGCAATTTTGTATTAATTTGACAAATGAAAAGCTTCAGCAACATTTTAACCAGCATGTTTTTAAAATGGAGCAAGAAGAATACAAAAAAGAGGAGATTGATTGGAGTTACATTGAATTTGTTGACAATCAAGATATTCTGGATCTCATTGAAAAGAAACCTGGAGGTATTATTGCTCTTCTGGATGAAGCCTGTATGTTTCCTAGATCAACACATGAAACTTTTGCTCAAAAAAGGTATCAGACATTCAAAAACCATAGAAGATTCAGCAAGCCCAAATTATCACGCAGTGACTTCACAATATTGCATTATGCTGGTGACGTTACTTATCAAACTGAATTGTTCCTGGACAAGAACAAAGATTATGTTGTTGCAGAACATCAGGCACTTCATGCTTCCAAATGCCCCTTTGTATCCGGTTTGTTCCCCCTGCCCCTGAAGAATCACCAACAATCAAAGTTCTCTTCAATAGGTTCTCGATTTAAGCAACAATTGCAATCGCTACTTGAAACTCTTAGTGCCACCGAGCCGCACTACATTCGGTGTGTAAAACATAATTTGCTTAAGCCAGCAATTTTTGAGCATAAAAATGTTTTGCAGCAATTGCGTTGTGGGGGAGTTATGGAGGCGATAAGGATTAGCTGTGCTGGATATCCTACTAGAAAAACCTTTGATGAGTTTGCAGACAGATTTGGCCTTCTTGCACCTGAAGCTCTGGATGGAAG	2063	0.4014	MVAAVNPVVGSHVWVEDPDVSWIDGEVLDVNGEAIKVLCTSGKTVVVKASSIHPKDTEVPSCGVDDMTKLAYLHEPGVLDNLRMRYDINEIYTYTGNILIAVNPFTKLPHLYDSHMMAQYKGAAFGELSPHPFAVADAAYRLMVNEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQMGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKYKLGKPAAFHYLNQSNCYEIEGLDEGKEYIATRRAMDVVGMSSEEQDAIFRVVAAILHLGNIEFAKGKEIDSSMPKDEKSMFHLQTAAELFMCDAKALEDSLCKRVIVTRDETIIKCLDPEAAALSRDALAKIVYSRLFDWLVEKINSSIGQDPDSKSLIGVLDIYGFESFKNNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKRYQTFKNHRRFSKPKLSRSDFTILHYAGDVTYQTELFLDKNKDYVVAEHQALLXASKCPFVSGLFPLPLKNHXQQSKFSSIGSRFKQQLQSLLETLSATEPHYIRCVKPXNLLKPAIFEHKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFADRFGLLAPEALDG	690

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci428g0012	690	PRINTS	Myosin heavy chain signature	92	111	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Prci428g0012	690	PRINTS	Myosin heavy chain signature	149	174	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Prci428g0012	690	PRINTS	Myosin heavy chain signature	196	223	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Prci428g0012	690	PRINTS	Myosin heavy chain signature	429	457	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Prci428g0012	690	PRINTS	Myosin heavy chain signature	482	510	IPR001609	GO:0003774\|GO:0005524\|GO:0016459
	Prci428g0012	690	CDD	MYSc_Myo11	76	690	IPR036018	-
	Prci428g0012	690	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	33	687	IPR027417	-
	Prci428g0012	690	ProSiteProfiles	Myosin N-terminal SH3-like domain profile.	8	57	IPR004009	GO:0003774\|GO:0005524\|GO:0016459
	Prci428g0012	690	Gene3D	Myosin VI head, motor domain, U50 subdomain	312	601	-	-
	Prci428g0012	690	SMART	MYSc_2a	57	690	IPR001609	GO:0003774\|GO:0005524\|GO:0016459

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci428g0012	1	689	Myosins gene family	AT1G04160	82.754	0.0	1232

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci428g0012	K10357		-	gmx:100819463	1273.84

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