Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci428g0012 ATGGTTGCTGCTGTCAATCCTGTTGTTGGGTCCCATGTTTGGGTAGAGGATCCTGATGTGTCTTGGATTGATGGTGAGGTTTTGGATGTTAATGGAGAAGCAATCAAAGTCCTTTGCACTTCAGGGAAAACAGTGGTTGTTAAAGCTTCCAGTATTCATCCTAAAGATACTGAGGTGCCATCATGTGGAGTGGATGATATGACAAAGCTAGCTTACCTGCATGAACCTGGAGTCCTGGACAACCTGAGAATGAGATATGATATCAATGAAATTTATACTTACACTGGAAATATATTGATTGCTGTGAACCCTTTTACAAAGCTTCCTCATCTATATGATAGCCATATGATGGCACAATATAAAGGGGCAGCTTTTGGTGAGCTGAGTCCACATCCATTTGCAGTTGCAGATGCTGCATATAGGCTTATGGTTAATGAGGGAATCAGCCAATCAATATTGGTCAGTGGTGAAAGTGGGGCTGGTAAAACAGAGAGTACCAAATTACTAATGCGTTATCTTGCTTATATGGGAGGACGAGCAGCTGCTGAAGGTAGGACTGTTGAGCAGAAAGTCTTGGAGTCTAATCCTGTTTTAGAAGCCTTTGGCAATGCAAAGACTGTTAGGAACAATAATTCAAGTCGCTTTGGTAAATTCGTGGAGATTCAATTTGATCAGATGGGGAGAATTTCAGGAGCTGCCATAAGAACTTATCTTCTGGAAAGATCACGTGTCTGCCAGGTGTCAGATCCAGAGAGGAATTATCACTGTTTCTACATGCTCTGTGCTGCACCTCCTGAGGATGTTAAGAAGTACAAGTTGGGAAAGCCAGCAGCATTTCATTATCTAAATCAATCAAATTGCTATGAGATAGAAGGGCTTGATGAAGGTAAAGAATATATTGCCACAAGAAGAGCAATGGATGTTGTTGGAATGAGTTCTGAGGAGCAGGATGCAATATTTCGTGTGGTAGCTGCAATTTTGCATCTTGGAAACATTGAATTTGCCAAAGGGAAGGAAATAGACTCATCTATGCCCAAGGATGAAAAATCTATGTTCCATCTACAAACTGCTGCTGAGCTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAGCGTGTAATTGTTACTCGTGATGAAACCATCATAAAATGTTTGGATCCAGAAGCTGCTGCACTTAGCCGAGATGCTTTGGCTAAAATTGTTTACTCTAGGCTGTTTGATTGGCTGGTGGAGAAAATTAATAGTTCAATTGGTCAAGATCCTGATTCAAAGTCCCTAATTGGCGTGCTGGATATTTATGGGTTTGAGAGTTTCAAAAATAACAGTTTTGAGCAATTTTGTATTAATTTGACAAATGAAAAGCTTCAGCAACATTTTAACCAGCATGTTTTTAAAATGGAGCAAGAAGAATACAAAAAAGAGGAGATTGATTGGAGTTACATTGAATTTGTTGACAATCAAGATATTCTGGATCTCATTGAAAAGAAACCTGGAGGTATTATTGCTCTTCTGGATGAAGCCTGTATGTTTCCTAGATCAACACATGAAACTTTTGCTCAAAAAAGGTATCAGACATTCAAAAACCATAGAAGATTCAGCAAGCCCAAATTATCACGCAGTGACTTCACAATATTGCATTATGCTGGTGACGTTACTTATCAAACTGAATTGTTCCTGGACAAGAACAAAGATTATGTTGTTGCAGAACATCAGGCACTTCATGCTTCCAAATGCCCCTTTGTATCCGGTTTGTTCCCCCTGCCCCTGAAGAATCACCAACAATCAAAGTTCTCTTCAATAGGTTCTCGATTTAAGCAACAATTGCAATCGCTACTTGAAACTCTTAGTGCCACCGAGCCGCACTACATTCGGTGTGTAAAACATAATTTGCTTAAGCCAGCAATTTTTGAGCATAAAAATGTTTTGCAGCAATTGCGTTGTGGGGGAGTTATGGAGGCGATAAGGATTAGCTGTGCTGGATATCCTACTAGAAAAACCTTTGATGAGTTTGCAGACAGATTTGGCCTTCTTGCACCTGAAGCTCTGGATGGAAG 2063 0.4014 MVAAVNPVVGSHVWVEDPDVSWIDGEVLDVNGEAIKVLCTSGKTVVVKASSIHPKDTEVPSCGVDDMTKLAYLHEPGVLDNLRMRYDINEIYTYTGNILIAVNPFTKLPHLYDSHMMAQYKGAAFGELSPHPFAVADAAYRLMVNEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQMGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKYKLGKPAAFHYLNQSNCYEIEGLDEGKEYIATRRAMDVVGMSSEEQDAIFRVVAAILHLGNIEFAKGKEIDSSMPKDEKSMFHLQTAAELFMCDAKALEDSLCKRVIVTRDETIIKCLDPEAAALSRDALAKIVYSRLFDWLVEKINSSIGQDPDSKSLIGVLDIYGFESFKNNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKRYQTFKNHRRFSKPKLSRSDFTILHYAGDVTYQTELFLDKNKDYVVAEHQALLXASKCPFVSGLFPLPLKNHXQQSKFSSIGSRFKQQLQSLLETLSATEPHYIRCVKPXNLLKPAIFEHKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFADRFGLLAPEALDG 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci428g0012 690 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci428g0012 690 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci428g0012 690 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci428g0012 690 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci428g0012 690 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci428g0012 690 CDD MYSc_Myo11 76 690 IPR036018 -
Prci428g0012 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 687 IPR027417 -
Prci428g0012 690 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci428g0012 690 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Prci428g0012 690 SMART MYSc_2a 57 690 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci428g0012 690 Pfam Myosin N-terminal SH3-like domain 10 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci428g0012 690 FunFam Class V myosin 439 579 - -
Prci428g0012 690 FunFam Myosin 2 312 425 - -
Prci428g0012 690 FunFam Myosin heavy chain 252 307 - -
Prci428g0012 690 Gene3D - 252 310 - -
Prci428g0012 690 Gene3D - 439 623 - -
Prci428g0012 690 Pfam Myosin head (motor domain) 64 687 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci428g0012 690 ProSiteProfiles Myosin motor domain profile. 62 690 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci428g0012 690 PANTHER MYOSIN 54 686 - -
Prci428g0012 690 Gene3D Kinesin motor domain 65 662 IPR036961 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci428g0012 1 689 Myosins gene family AT1G04160 82.754 0.0 1232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci428g0012 K10357 - gmx:100819463 1273.84