Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci427g0007 TTTAATTTAACCTGTCTTGCTGCAGCTGCAACTGGTGCCGGTTTCATCGCACGAGACATAACATTCGAAAACTACGCTGGTCCGAGCAAGCACCAAGCGGTTGCCCTCCGCGTCGGAGCAGACCACGCGGTGGTCCACCGCTGCGAGGTCCTGGGATACCAGGACACGTGTTATGTTCACTCCAACCGTCAGTTCTTCCGCGAATGTAACATCTACGGTACAGTTGACTTTATTTTTGGAAATGCGGCTGTCGTTTTCCAAAACTGCAGCCTTTATGCTCGGAAGCCGATGGCCCAACAAAAGAACACCGTCACAGCCCAGAACCGAAAAGACCCGAATCAGAACACGGGGATATCCATCCACGACTGTCAGATCCTTCCGGCCCCGGACCTCGAGCCGGAAAAGGGAAACATCTACACCTATCTTGGCCGTCCATGGAAATTATACTCTAGAACCGTGTACATGCAGTCATTCATGGACGATCACATACATCCGAGAGGATGGCTGGAGTGGGACGCATCATTTGCTTTGGACACATTGTACTACGGCGAGTACATGAATCATGGCCCGGGTGCGGCCATTGGAAAACGGGTCACATGGCCCGGATATCGGGTCATCACGTCACCCGTGGAGGCAAGACGGTTCACGGTGGCGGAATTCATATCTGGTTCGTCGTGGCTGCCGTCAACGGGAGTGGCATTTTTGGCTGGGCTATCCACTTAA 723 0.5311 FNLTCLAAAATGAGFIARDITFENYAGPSKHQAVALRVGADHAVVHRCEVLGYQDTCYVHSNRQFFRECNIYGTVDFIFGNAAVVFQNCSLYARKPMAQQKNTVTAQNRKDPNQNTGISIHDCQILPAPDLEPEKGNIYTYLGRPWKLYSRTVYMQSFMDDHIHPRGWLEWDASFALDTLYYGEYMNHGPGAAIGKRVTWPGYRVITSPVEARRFTVAEFISGSSWLPSTGVAFLAGLST 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci427g0007 240 Gene3D - 2 238 IPR012334 -
Prci427g0007 240 ProSitePatterns Pectinesterase signature 2. 71 80 IPR033131 -
Prci427g0007 240 PANTHER PECTINESTERASE 9 228 - -
Prci427g0007 240 SUPERFAMILY Pectin lyase-like 9 237 IPR011050 -
Prci427g0007 240 FunFam Pectinesterase 4 3 238 - -
Prci427g0007 240 Pfam Pectinesterase 8 223 IPR000070 GO:0030599|GO:0042545
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci427g0007 9 239 Carbohydrate Esterase AT5G53370 77.922 2.66e-137 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci427g0007 - - lang:109330048 429.483