Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci425g0001 ATGACTTCAAGATCCTTCCCTCCAGCTCCAAGTCACAATTTTTTCACCAAGAACATGGTTCTTTTCCTGGCTCTCACAATCTCAGCGTCTCTTGTTATTTTCTGCTCAATACTTTACTTTCTATACCATGTCTGGTACTCTGTTGTACATAGAGCTAAAACGATCCCATTTGATGCAAATTCTCCTTTGAAGCTCCAAAGATTCTCAGACAAAGAGCTCAAGCAAGCCACCAATGGCTTTCACACTGAAAACGTCATAGGCAAAGGTGGGTCTAGCACAGTTTTTAAAGGAAAGCTTAAAGATGGGAAATTTATTGCTATTAAGCGTCTAGATGCTTTGTGTTTACAAACAGAGCAAGAGTTTCAGAATGAGCTTCAGATTCTTGGTGGATTAACATCCCCTTTCCTATCGACCCTACTGGGATATTGTATGGAGGACAACCGGAGAGCTTTGGTGTTTGAATATATGCCTAAGAGAAGCTTGCAGGAGTCTCTCTTTGGAGAAAATGTCTGTTTCAGTTTAAGCTGGGAAACAAGGTTTTTTGTAATATTGGATGTTTCTAGAGCTTTGGAATTCCTGCACCTTGAATGTGATCCTCCAGTGATTCATGGGGATATTAAGCCAAGCAATGTTCTACTTGATGAAGATTACCATGCAAAGATCTCGGATTTTGGATTGTCAAGGATTAAAGTGGAGGATGGTGAATTTAGTAGGAATTTCTGTGATAAGAGTCGGGACCTATGGAAGAGCCAAGAGTTTTCAGGTAATTTAACTGCAGAAAGCCCAGCCACTGATACTTTGCAGGCATCTCCTTCATCCAAGTATAGTAAAGCAGGTTATAATGTTGGAGCTTTGAACTTGGATTCGGTGAATTCTAGTGCCTTCATCAGTGAAAATGAAGTGAGGACAAGTGCTGTCAAGGGGAAGGAAATCTCAAGTTTGTACATTGGTGGGGACGATTGGGATAACAACTTTGTTCCTTATGATGGTGACTTTTCCAGCATTGATCATGGTAAGGAGTTAAATGTTAATGCTTCATCAGTAGATGAAGAAAAGCCAGGTGAAAAACCATGGGGTAAAGATTGGTGGTGGAGGCAGGATGAAAGTTCAGAATTATGCAGTAAAGATTATGTCATGGAGTGGATAGGGAGTCAGATTTATCCACCAAACACTAATTGGGATGAAGAGAAGAACATCCCTGAGAAAACAGAACTGGAAAATCCAAATCCAACAGATAAACCCGATGATGTAAATGGATCACAATTTCAAGCAATGAGCACAAAAGATGCTGACACTGGCGCTGCTGAGAACAAAGAATCAGTGGAAAAGAAATATCATAAGAAGCATAGGAAGATGCAAGAGTTGTGGAAAGAAGAGAATCTGGCAGAATTAAGCAAGAACAGAGGCAACCTGAAAAATTTACAGACTAAGTTGAAGAAGTTTAAAGTACGACATTTTGATTTGGGTAAAAGGTTTTATTTCTTCAGATGTAAAAAACTTGGAAGGGAGGATCAGAATGGCTATGATCAAAATGGGGAGTTCAGTTTCAGAAGAGGTTGGAAAGAGAAAGGAAGCAGTCCTTCCATTGGGAGCGAGATGCGAAGCGGAGATCTTTTCAGCAGCACAGCCAGCATGAGAGGGACGCTGAGCTATGCTGCTCCAGAATATGGTGGATTTGATGGCTTCTCAACGGAGAAGACTGACATTTACAGTTTAGGAGTATTGATCCTTGTGATTGTTTCAGGAAGAAGACCATTACATATTCCTTTATCCCCACTGAAGCTTGAGAAAGCCAATCTAGTAAGCTGGTGTAAGCAATTGGCACAATCTGGTAACATTTTAGAGCTTGTAGATGAGAGGTTGAAAGAAGATTACAACAAAGAGCAAGCAAGCTTGTGCATCAACATGGCACTTTCTTGCTTACAGAAAGATCCAGAATTGAGGCCAGATATTGGGGATATTGTTAAGAATCTGAAGGGGTTATGGTTTATGAATCATGAAGAAGACAAAAAGGTACTGCAGAATAGGTTTTTTATGTTAATATTTTTTTGTTAG 2055 0.4005 MTSRSFPPAPSHNFFTKNMVLFLALTISASLVIFCSILYFLYHVWYSVVHRAKTIPFDANSPLKLQRFSDKELKQATNGFHTENVIGKGGSSTVFKGKLKDGKFIAIKRLDALCLQTEQEFQNELQILGGLTSPFLSTLLGYCMEDNRRALVFEYMPKRSLQESLFGENVCFSLSWETRFFVILDVSRALEFLHLECDPPVIHGDIKPSNVLLDEDYHAKISDFGLSRIKVEDGEFSRNFCDKSRDLWKSQEFSGNLTAESPATDTLQASPSSKYSKAGYNVGALNLDSVNSSAFISENEVRTSAVKGKEISSLYIGGDDWDNNFVPYDGDFSSIDHGKELNVNASSVDEEKPGEKPWGKDWWWRQDESSELCSKDYVMEWIGSQIYPPNTNWDEEKNIPEKTELENPNPTDKPDDVNGSQFQAMSTKDADTGAAENKESVEKKYHKKHRKMQELWKEENLAELSKNRGNLKNLQTKLKKFKVRHFDLGKRFYFFRCKKLGREDQNGYDQNGEFSFRRGWKEKGSSPSIGSEMRSGDLFSSTASMRGTLSYAAPEYGGFDGFSTEKTDIYSLGVLILVIVSGRRPLHIPLSPLKLEKANLVSWCKQLAQSGNILELVDERLKEDYNKEQASLCINMALSCLQKDPELRPDIGDIVKNLKGLWFMNHEEDKKVLQNRFFMLIFFC 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci425g0001 684 ProSiteProfiles Protein kinase domain profile. 80 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci425g0001 684 MobiDBLite consensus disorder prediction 426 448 - -
Prci425g0001 684 FunFam Os07g0541700 protein 156 241 - -
Prci425g0001 684 FunFam Receptor-like serine/threonine-protein kinase At4g25390 49 155 - -
Prci425g0001 684 PANTHER OS07G0586332 PROTEIN 8 660 IPR044576 -
Prci425g0001 684 SUPERFAMILY Protein kinase-like (PK-like) 60 665 IPR011009 -
Prci425g0001 684 ProSitePatterns Protein kinases ATP-binding region signature. 86 108 IPR017441 GO:0005524
Prci425g0001 684 MobiDBLite consensus disorder prediction 402 421 - -
Prci425g0001 684 Gene3D Phosphorylase Kinase; domain 1 47 155 - -
Prci425g0001 684 SMART serkin_6 80 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci425g0001 684 Pfam Protein kinase domain 80 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci425g0001 684 Pfam Protein kinase domain 542 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci425g0001 684 Gene3D Transferase(Phosphotransferase) domain 1 522 678 - -
Prci425g0001 684 Gene3D Transferase(Phosphotransferase) domain 1 156 262 - -
Prci425g0001 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci425g0001 529 658 Receptor kinase-like Gene Family AT3G58690 30.534 7.18e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Prci425g0001 Pkinase 1.9e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci425g0001 - - qlo:115992360 851.662