Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci421g0001 ATGGAGAGGGATGAGAGAATGATGGAGAAAGCGTTGAATAGTGGTGTGGTGGTACGTTACATTGTGAAACCAGCAACAGCAAGTGACTTCAAAGGCGGCGCCGAGAACAATGGATCATCGTCGTTGTCTGGGGTTATCAAGAAGAGCAAAGTTGTGTGGACAAGCGATCTTCAAAGCCGTTTTTTACAAGCCATAAACATTATTGGGTTAGAAGTAAATGCAGTTCCAAAAAAGATTCTTGAAGTCATGCAAACACCAGGACTGACTAGGGAAAATGTGGCAAGTCACTTGCAGAAATATCGGCTTTTTCTAAAGAGAGTGGCTCGGATGTTTGCGATGCTAATGAACCATGAGACAAACAAGAAGGATGTATTCACAAGTTTGGGATCAAAGTACCCTAATTCACTGATGTTAAAGAACATTAAAGAGGAATTCAGAAGAATGTTAAAATTCAGAAAACTTAGATCAACTTTTTCTTCTTCATATCCTTATTCCTCATCAGCCAACAAGAACCCTAATTCTTCTCCCTTATTCAAACCAACATCCATGTTTCAGTATCATCATCATTCTAGCTTCCCAAAGTCTCATCATCGTCATTCTACTTTTTCATATTCCACCCCAAAAATGAACGCTTATGAAATGTTACAGGATCAAATAATGCCTGCAAGTACTTCAAGTAATATTCACACCAACAATTTCACTGGCACTGGATCAGGGTTTGCATCAGCTTTTGATAAACAAAGGGATCAGATGATTCAGCCTATTGGATCAAATATTGGTGTTTCAAACACTTATTATGATTCTTGTGGGTATAATATTGATAATGATAATTCCTTCATCAATGGTTCATCAAATTTCGGTTATTTGGTTGATGGAAGGTTAAGTCCCTCTAGCTGTGAGCTTTTTAGGTCAAATCAAAGTATGGCAGATAAAGCGGGAAGCAATAATGACAATATTCTGGAAAATATTTTGGAGCAAGAAAATCTGTACGAGGTTTTGAATAATGAAGGAGATCACAGTTATCAAACTATTGAAGTTGAAGGGAATTACAATAATGACGCCTCACTTGTGCCACTAGCTCAGTATTCAAACTGCAGTACTGGATTTGATTACTGTGGTGATATCATCATGGAAGAATTAAATGATAATGGGCAGTTCTCTAATCAGTATGTCTAA 1176 0.375 MERDERMMEKALNSGVVVRYIVKPATASDFKGGAENNGSSSLSGVIKKSKVVWTSDLQSRFLQAINIIGLEVNAVPKKILEVMQTPGLTRENVASHLQKYRLFLKRVARMFAMLMNHETNKKDVFTSLGSKYPNSLMLKNIKEEFRRMLKFRKLRSTFSSSYPYSSSANKNPNSSPLFKPTSMFQYHHHSSFPKSHHRHSTFSYSTPKMNAYEMLQDQIMPASTSSNIHTNNFTGTGSGFASAFDKQRDQMIQPIGSNIGVSNTYYDSCGYNIDNDNSFINGSSNFGYLVDGRLSPSSCELFRSNQSMADKAGSNNDNILENILEQENLYEVLNNEGDHSYQTIEVEGNYNNDASLVPLAQYSNCSTGFDYCGDIIMEELNDNGQFSNQYV 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci421g0001 391 Coils Coil 316 336 - -
Prci421g0001 391 Gene3D - 45 108 - -
Prci421g0001 391 FunFam Two-component response regulator 45 108 - -
Prci421g0001 391 Pfam Myb-like DNA-binding domain 51 101 IPR001005 -
Prci421g0001 391 SUPERFAMILY Homeodomain-like 46 106 IPR009057 -
Prci421g0001 391 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 32 285 IPR044841 GO:0003700|GO:0006355
Prci421g0001 391 NCBIfam myb-like DNA-binding domain, SHAQKYF class 48 103 IPR006447 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci421g0001 31 133 Response Regulator Gene Family AT2G27070 51.456 3.39e-21 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci421g0001 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci421g0001 - K14491 pcin:129297056 765.377