Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci419g0004 ATGATATCTTCTGGGGTTAACTTGGTGATGACTGTGATTGGATTTGCGATGAGCACTATGTTCATCGTTTTCGTTTGCACTAGACTTATATGTGCTCGAATTCACTTGAATGCTTCTCGCCGATCCCTCCTTATTGCTTCCAGATCCGATCTGAGTCTGCTGGAGCGGGGATTTCATGGTCTTGAACCCACATCAGTAGAGAACTTCCCAACGAAGAAGTACAGTGATGGATGCTTTGCTGCTGCAGAAAATTCTCAATGTACAGTTTGTCTCTCTGAATACCAAGGTCAGGATGTACTGCGCATCCTCCCATATTGTGGACACTTCTTCCATGCAACCTGCATAGACCTATGGCTGCAGCAGCATTCGACATGCCCTGTATGTCGAATCTCTTTACGCAAATCATCGGAGAGAAAGCGCGTAATGCAGCCATTATTTAGTGCCGTTGTTCAATCTAATTTTGGCGTGGAATCTATTCCCACTCATCCTTTTCACTGTATGATGGCTAATGATAATGAGTTATCATCAAGAAACCTGGACATGCATGGTGTGAACCCTGTACAAGAGGATCATTTTGCACCTGAAGGTGGTGGAACCGTTGGTACAGAGAATGCCACCAATATAAGTCATGGTGATCAGTCCATGAAAGATACAGGAAAGAAGCATTTAGACAGCACATCAATAATCCCCTTAAGCTAA 699 0.4392 MISSGVNLVMTVIGFAMSTMFIVFVCTRLICARIHLNASRRSLLIASRSDLSLLERGFHGLEPTSVENFPTKKYSDGCFAAAENSQCTVCLSEYQGQDVLRILPYCGHFFHATCIDLWLQQHSTCPVCRISLRKSSERKRVMQPLFSAVVQSNFGVESIPTHPFHCMMANDNELSSRNLDMHGVNPVQEDHFAPEGGGTVGTENATNISHGDQSMKDTGKKHLDSTSIIPLS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci419g0004 232 Pfam Ring finger domain 86 129 IPR001841 -
Prci419g0004 232 PANTHER OS11G0150450 PROTEIN 1 186 - -
Prci419g0004 232 CDD RING-H2_EL5-like 86 129 - -
Prci419g0004 232 SUPERFAMILY RING/U-box 81 134 - -
Prci419g0004 232 MobiDBLite consensus disorder prediction 190 232 - -
Prci419g0004 232 FunFam E3 ubiquitin-protein ligase ATL6 51 135 - -
Prci419g0004 232 ProSiteProfiles Zinc finger RING-type profile. 87 129 IPR001841 -
Prci419g0004 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 135 IPR013083 -
Prci419g0004 232 SMART ring_2 87 128 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci419g0004 6 132 Rapid Response to Elicitors AT2G35000 34.328 1.60e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci419g0004 - - pcin:129309455 454.136