Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci419g0003 ATGATATCTTCTGGGGTTAACTTGGTGATGACTGTGATTGGATTTGCGATGAGCACTATGTTCATCGTTTTCGTTTGCACTAGACTTATATGTGCTCGAATTCACTTGAATGCTTCTCGCCGATCCCTCCTTATTGCTTCCAGATCCGATCTGAGTCTGGTAAACCTGGAGCGGGGATTTCATGGTCTTGAACCCACATCAGTAGAGAACTTCCCAACGAAGAAGTACAGTGATGGATGCTTTGCTGCTGCAGAAAATTCTCAATGTACAGTTTGTCTCTCTGAATACCAAGGTCAGGATGTACTGCGCATCCTCCCATATTGTGGACACTTCTTCCATGCAACCTGCATAGACCTATGGCTGCAGCAGCATTCGACATGCCCTGTATGTCGAATCTCTTTACGCAAATCATCGGAGAGAAAGCGCGTAATGCAGCCATTATTTAGTGCCGTTGTTCAATCTAATTTTGGCGTGGAATCTATTCCCACTCATCCTTTTCACTGTATGATGGCTAATGATAATGAGTTATCATCAAGAAACCTGGACATGCATGGTGTGAACCCTGTACAAGAGGATCATTTTGCACCTGAAGGTGGTGGAACCGTTGGTACAGAGAATGCCACCAATATAAGTCATGGTGATCAGTCCATGAAAGATACAGGAAAGAAGCATTTAGACAGCACATCAATAATCCCCTTAAGCTAA 705 0.4383 MISSGVNLVMTVIGFAMSTMFIVFVCTRLICARIHLNASRRSLLIASRSDLSLVNLERGFHGLEPTSVENFPTKKYSDGCFAAAENSQCTVCLSEYQGQDVLRILPYCGHFFHATCIDLWLQQHSTCPVCRISLRKSSERKRVMQPLFSAVVQSNFGVESIPTHPFHCMMANDNELSSRNLDMHGVNPVQEDHFAPEGGGTVGTENATNISHGDQSMKDTGKKHLDSTSIIPLS 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci419g0003 234 FunFam E3 ubiquitin-protein ligase ATL6 52 137 - -
Prci419g0003 234 CDD RING-H2_EL5-like 88 131 - -
Prci419g0003 234 PANTHER OS11G0150450 PROTEIN 1 188 - -
Prci419g0003 234 SUPERFAMILY RING/U-box 83 136 - -
Prci419g0003 234 ProSiteProfiles Zinc finger RING-type profile. 89 131 IPR001841 -
Prci419g0003 234 MobiDBLite consensus disorder prediction 192 234 - -
Prci419g0003 234 Pfam Ring finger domain 88 131 IPR001841 -
Prci419g0003 234 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 55 137 IPR013083 -
Prci419g0003 234 SMART ring_2 89 130 IPR001841 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci419g0003 6 134 Rapid Response to Elicitors AT2G35000 35.821 3.77e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci419g0003 - - pcin:129309455 462.996