Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci411g0001 ATGGACTGGTCTAGGGGTCCCACCGTCGGCCGGGGTGCCACCGCCACTGTTTCAATTGCCCGTGATTGCCGGTCCGGTCGCTTGTTCGCTGTCAAGTCGGCGGAGCTGAACCGATCGGAGTTGCTTCAAAGGGAACAGAAAATTCTGTCCACATTGAAATCTGCTCACATTGTAGCGTACCAAGGTTTTGACATTACGTCGGAGAGAAACGTACTTTGGTACAATCTGTTCATGGAGTATGCACCTTATGGTACGCTAGCCGACATGACTCGCCGGCGAGACGGACTAGATGAGGCAGTGGTTCGAACCTATGCGCGCCAAATCTTGCTGGGGCTTGACCATCTTCATTCAAATGGCATAGTGCATTGTGATATTAAAGGTAAGAATGTTTTGATCACGGAGGAAGGGGCTAAAATCGCAGACTTGGGTTGTGCTCGGAGGGGCGCTGATGCGGTGGATTGCGGCGGGTTGGTTGCCGGTACACCGTTGTTCATGGCGCCAGAGGTGGCGCGTGGGGAGCAACAGGGTTTCGCTGCCGACGTGTGGTCTCTGGGGTGTACTGTGTTGGAGATGATCACCGGGAAGGCTCCCTGGCCAGATGTAGCCGACCCGCTAAGTGCGGTTTATCGGATCGGGTTCTCAGGCGATGTGCCAGAGATTCCAGGGTTCATGTCGGAGAAAGGGAGGGACTTCGTGAGCAAGTGTCTGAAGAGAGACCCGAATGAGAGGTGGTCCGTGGCCGAGCTCCTCAGGCACGCGTTTGTGGAAGAATCAACTTCATCTAAATCATCCATGGAAGAATTTGAAAGCTCTAAGCTGGATACTCCGACGAGTGTAATAGATGGATCCATTTGGGATTCGTGGGAGACCACCCAAGACCCGACCCGTGTTCGTTCCAGCAATCCTGGCAGAGACCGGATCCGTAGGTTGTGTGCAGAAGCTACGACGTCGTTTGATTGCAATGAGCCCAACTGGGGATGGGATGATGAAGAGTGGGTCACAGTGAGAAATAGCAATGAGACAAGTGAGAATTACAATGTTGACCTAGGACATGAGGGAAGTTTAGTGCACTGTTATGAACCCAAAACGGTAATTACAATTGGGTTGTGGCTATGTAATAATGTGAATTGTAAGGTTTGTTGTAATGGCAGCAACTACATTAGTTGTAACAAAGGATTAATGTTAGGCTATGATGATTGGTCATATGTAAGGATGATTGTTCTCAAGAGGGAAATTGAATCTCAAAATAAGGAAAGAATTTTTCACGGTTTGCTTCTGTCTCTCACTCTATAG 1293 0.4988 MDWSRGPTVGRGATATVSIARDCRSGRLFAVKSAELNRSELLQREQKILSTLKSAHIVAYQGFDITSERNVLWYNLFMEYAPYGTLADMTRRRDGLDEAVVRTYARQILLGLDHLHSNGIVHCDIKGKNVLITEEGAKIADLGCARRGADAVDCGGLVAGTPLFMAPEVARGEQQGFAADVWSLGCTVLEMITGKAPWPDVADPLSAVYRIGFSGDVPEIPGFMSEKGRDFVSKCLKRDPNERWSVAELLRHAFVEESTSSKSSMEEFESSKLDTPTSVIDGSIWDSWETTQDPTRVRSSNPGRDRIRRLCAEATTSFDCNEPNWGWDDEEWVTVRNSNETSENYNVDLGHEGSLVHCYEPKTVITIGLWLCNNVNCKVCCNGSNYISCNKGLMLGYDDWSYVRMIVLKREIESQNKERIFHGLLLSLTL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci411g0001 430 SUPERFAMILY Protein kinase-like (PK-like) 3 302 IPR011009 -
Prci411g0001 430 ProSiteProfiles Protein kinase domain profile. 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci411g0001 430 Gene3D Transferase(Phosphotransferase) domain 1 2 301 - -
Prci411g0001 430 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Prci411g0001 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Prci411g0001 430 SMART serkin_6 3 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci411g0001 430 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 305 - -
Prci411g0001 430 CDD STKc_MAPKKK 2 255 - -
Prci411g0001 430 Pfam Protein kinase domain 6 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci411g0001 2 336 MAP Kinase Kinase Kinase AT5G55090 47.175 1.46e-100 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci411g0001 Pkinase 2.1e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci411g0001 K20716 - qsa:O6P43_031265 427.557