Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci410g0001 ATGTCACCGGACGGCGAGGTGGTTTCTTCGACTCCAGGAGCATTCAGGCTCCGGTGGGACGTCTTCCTGAGCTTTAGAGGTGCGGATACTCGTCGTTGCTTTACCAAACCCCTCTTCAACGCCCTCCAATCTCGCGACGTTCGGGTTTTCCTCGACGACGTTGGATTGGATCGCGGTGACCAGATAGCACCGAGTCTGCTGGAAGCCATCGATGACTCCGCCGCTTCGATCATCATCTTCTCCCCTAGATATGCTTCTTCTCATTGGTGTTTGGAGGAGCTTGCCAAGATTTGGGACTGCGGTAGACTGATTCTGCCAGTGTTCTTCAACGTCGACCCGAGTCATGTGCGAAAACAAGAGGGTCCATTCAGAAAATATTTCAAGAAACACGAAGCCAAGAGGAGCAAAGAAGAGGTAAGCAGATGGAGGGAAGCTATGAAGAAAATAGGTGGAATTGCTGGCTTCCCTTTCCGGCATCCCAGTGGAAATAAAGAAGACCTAATTCAACTTATAGTGACAAGGATTCTGAGAGAACTGAGTAATGCTCCGGTGGGTGTTGCTGAATTTACCGTTGGACTCGATGCTCGAATTGAAGAATTGTTGGAGTTGTTAGACATGAGATCCAACGGCATAAGAGTATTGGGATTGTATGGGATGGGTGGGGTTGGTAAGACAACCCTTGCAAAAGCTCTTTTTAACAGACTTGTTGTGCATTTTGAGCATCGCAGCTTCATTTCAAGTGTTAGAGAAGTTTCATCCAAAGATGGAGGTTTAATTTCTCTTAGAAACAGAATTATCAGTGACATTTCATCTCAAGTAGTGGTTGGTGACAACATTCCTGCTTTCAGAAGAATCGTTGATGAATATCCAGGTCTAATAATCCTGGATGATGTGGATGATGTGAAGCAGCTCGATACTCTAATAGTCAAAAGAGAATGGTTCCATAAAGGAAGCCGCATAGTAGTCACCTCAAGGAATACACAAGCTTTGCCTGAGCGTCATGTTAATGTTTTGTACGAGGTTCATGTATTGGGTGAGTCTGAGTCGCTAGAACTATTCAGTTACCATGCAATGAGGAGAAATGAACCTGCGGACAAAAATCTTTTGAAATTGTCGAAGGAAATAGTTTCTTTAACAGGAAGATTGCCTTTGGCTCTGGAAGTGTTTGGTTCAATGTTATTTGGTAAGAGAAGGGAAAAGGAATGGGTTGATGCTGTGGAGAAACTGAAGCAGACTCGACCTGGGAATCTCCAGGAAGTGTTGAAGATCAGTTATGAGGGGTTAGATGAACAAGAGAAATCCATCTTCCTCGACATTGCTTGTTTGTTCGTCCAGATGAGTATGAAGCGAGAAGATGTGATTGATATATTGAGAGGTTGTGGATTTAGGGGAGAGATAGCAATCACAGATCTCACAGAGAAGTGTTTGATCAAAATCAGAGAGGACGAAACGATTTGGATGCATGATCAAATTAGAGACATGGGAAGGCAAATCGTTGTGGATGAAAACCTTGTCGATCCCGGCATGCGTAGCAGATTGTGGGATCGGTCTGAAATTCTAGCTGTTTTGAGGAATTTTAAGGGAACGAGGAGTATTCAAGGCATGGTCCTAGACTTAGAGGAAAGATCTACTAAAGATCATAAGGATGAAGTAATTTCTGGGAAACACCTTCAATGGGGTTTGAGTTTTGCAAATGCTCGGGCATTCCTTAAGCAGTTGAACAAGAAATATTTTCAACGAGTTGAGATAGACGGAGAGGCTGTCGTGCTTCAAACCAAGTCCTTCGAAACAATGGTGAACTTGGTGCTGCTTCAGATCAATAATGTGAGATTGGAAGGGAAGTTCAAATCTTTCCCTCCAGAATTGAAGTGGTTACAATGGAAAGGATGCCCTTTAAAATTCATGCCTTCTGATTTTTTGCTCCGAGAATTGGCTGTCCTTGATCTCTCACGCGGCAAGATTGAGAATTTGTGGAATCGGGGAGGCTACAAGGTGCCAGAGAACATGATGGTCATGAACATGTCCCACTGCTACAACCTAGAAACGCTTCCTGATCTCTCTGGGTGTCGACGTTTAGAGAAGATTGTTCTCGAGAACTGCTTTAACCTGAGAAGAATTCATGAATCAATTAGCAATTTGACTACACTTCGTCATTTGAATCTGACTCTTTGCAGGGAACTTGCTGAGTTACCCAAGGATGTATCTGGGCTGAAAAATTTGGAGACCCTCTGTCTCTCATACTGCTTCAAGTTGAAATCGTTACCAGAAAACTTGACCAACTTGAAATCACTGAAAAAACTTCTTGCTGATCGCACGGCTTTGGCGGAGCTGCCCGAGACTATTTTTCACCTTGAGAAACTTGAAATTCTTATTTTAAATGGTTGCCAGAACCTAAAAAGGCTACCCGACAACATCGGACTCTTGTGTTCTCTGCAAGAGCTGTCTCTTGACCAATCTGGATTAGAAGAACTACCCAACTCTGTAGGGCGTTTAAAAAACCTTGAGAAGCTCAGTTTGATGCATTGTGAATCTCTCACTAGGATTCCTGATTCTATTGGAAATCTCGTATCACTTTCAAAGCTTTGGCTTTTTGGTAGTGCTATTGGAGAGCTTCCTTCTTCGGTTGGATCATTGTCTTATCTGAAAGAACTATCAGTAGGAAACTGTAAGTTTCTGAATAAATTGCCTGAGTCCATTAAGTCTATGGTTTCCATTGTTGAGCTTCAGCTAGATGGGGCAGTGATCACAGATTTGCCAGGTGAGATTGGAAATATGACGTTACTCAAAAAGCTTGAAATGAGGAATTGCCAGATGAGATATCTACCTAAATCGGTTGGCAACCTCACAGCTCTTACAACCTGGAACATTTTCAATGGTAACATTGTAGAACTACCAGAGTCCATCGGAAAGCTTGAAAATCTAGTCCATTTAAGGTTGGACCGATGCAGAATGCTCAGAAGGCTTCCTAATTCTATAGGACATTTGAAGTCCTTGTACCATCTTCGGATGGAGGAAACGGGTCTGACAGAATTACCTGAAAGCTTTGGTGAGCTTACGAGCTTAAGGACTTTGAAAATGGCCAAGAAGTCTGAAGATAACTTGCTTCAGGATTCTACTGAAATCTCATCTTTTTTCTGCAAAATGATATTTCTGAATGATCTAGATGCCCGAGGTTGGAAAATATCTGGGTCAATTCCTGATGATTTTGAGAAGTTATCGTGTTTGGAGACTTTGAATCTAAGCCAAAACAAATTTCACAGCCTTCCTTCCAGTTTGGCGGGTCTTTCCGTTCTCAGGGAACTCTTTCTTCAGAACTGCACAGAGCCGGTTTCTCTCCCTGCTCTTCCCTCGAGCTTGACAAAACTGGATGCTGCAAACTGTTGTTCCTTACAAAGCATTCATGACCTTTCAAATTTAAAAAGTTTAAAGGATCTGAACCTCGCAAACTGTATAAAATTGGTGGATATTCCTGGCCTTGAACGGTTGGAGTCTCTGAAGTGGTTGTACTTGGGTGGATGCATTGCATGCTCTTCCACAATCCGCAAGAGATTTTCCAAGGTTACACTGAGGAATTTAATAAATTTGAGCATGCCAGGAACAAGATTACCCAAATGGTTTTCAGGGCAAACTGTAAGCTTTTCAAAGCCCAAAAACCGTGAACTAACAGGTGTAATTATAGGCGTCATTCTTTCAATCAACCATGATATACCTGAAGCGCGAGATCTTCCTGGGGTAGTGGATATCAAACTAGATGTCCTTAAACTTGGCAAAAATATATGTACTACAGGATTGGACTTGCGTGGGTTGCCAACAACGAATGAAGAACACATACACCTTTGCAGGTTCCCAGATTACCATCATCTCATGCCCTTCTTGCGAGATGGTGACACATTTAGTGTGACTCGGTTAAACCCGCCTATGAATAAGGGTTTAGAGTTGAAAAAATGTGGGTTTCATTTGATCTTCGAAGGGGATGACGATTATAGTGGGGATGAAGAAACTTTGGACAGAAGCTTACAATCTGTGTCAGAAAAATTGGCTGAGTTTTTCAACACTTGTGAAGAAGGAAGCTCTGAAGATGGAATTGAGAGTGAAGATGATGAGTGCCAGGAGCAATTGGAGACACAAGAAATGAGGGAAGAGAAAATCTCATCTTCCATTCCCAGCAAGTCCAATGTTCTCTATTATATTATCAGACTGTTTCTTTTCTTGTTGATCTTGCTGCTAATAAGATTTGCCTTCGGCTATGATGTTAGAAGAGCCTTCAGGATCTGA 4275 0.4257 MSPDGEVVSSTPGAFRLRWDVFLSFRGADTRRCFTKPLFNALQSRDVRVFLDDVGLDRGDQIAPSLLEAIDDSAASIIIFSPRYASSHWCLEELAKIWDCGRLILPVFFNVDPSHVRKQEGPFRKYFKKHEAKRSKEEVSRWREAMKKIGGIAGFPFRHPSGNKEDLIQLIVTRILRELSNAPVGVAEFTVGLDARIEELLELLDMRSNGIRVLGLYGMGGVGKTTLAKALFNRLVVHFEHRSFISSVREVSSKDGGLISLRNRIISDISSQVVVGDNIPAFRRIVDEYPGLIILDDVDDVKQLDTLIVKREWFHKGSRIVVTSRNTQALPERHVNVLYEVHVLGESESLELFSYHAMRRNEPADKNLLKLSKEIVSLTGRLPLALEVFGSMLFGKRREKEWVDAVEKLKQTRPGNLQEVLKISYEGLDEQEKSIFLDIACLFVQMSMKREDVIDILRGCGFRGEIAITDLTEKCLIKIREDETIWMHDQIRDMGRQIVVDENLVDPGMRSRLWDRSEILAVLRNFKGTRSIQGMVLDLEERSTKDHKDEVISGKHLQWGLSFANARAFLKQLNKKYFQRVEIDGEAVVLQTKSFETMVNLVLLQINNVRLEGKFKSFPPELKWLQWKGCPLKFMPSDFLLRELAVLDLSRGKIENLWNRGGYKVPENMMVMNMSHCYNLETLPDLSGCRRLEKIVLENCFNLRRIHESISNLTTLRHLNLTLCRELAELPKDVSGLKNLETLCLSYCFKLKSLPENLTNLKSLKKLLADRTALAELPETIFHLEKLEILILNGCQNLKRLPDNIGLLCSLQELSLDQSGLEELPNSVGRLKNLEKLSLMHCESLTRIPDSIGNLVSLSKLWLFGSAIGELPSSVGSLSYLKELSVGNCKFLNKLPESIKSMVSIVELQLDGAVITDLPGEIGNMTLLKKLEMRNCQMRYLPKSVGNLTALTTWNIFNGNIVELPESIGKLENLVHLRLDRCRMLRRLPNSIGHLKSLYHLRMEETGLTELPESFGELTSLRTLKMAKKSEDNLLQDSTEISSFFCKMIFLNDLDARGWKISGSIPDDFEKLSCLETLNLSQNKFHSLPSSLAGLSVLRELFLQNCTEPVSLPALPSSLTKLDAANCCSLQSIHDLSNLKSLKDLNLANCIKLVDIPGLERLESLKWLYLGGCIACSSTIRKRFSKVTLRNLINLSMPGTRLPKWFSGQTVSFSKPKNRELTGVIIGVILSINHDIPEARDLPGVVDIKLDVLKLGKNICTTGLDLRGLPTTNEEHIHLCRFPDYHHLMPFLRDGDTFSVTRLNPPMNKGLELKKCGFHLIFEGDDDYSGDEETLDRSLQSVSEKLAEFFNTCEEGSSEDGIESEDDECQEQLETQEMREEKISSSIPSKSNVLYYIIRLFLFLLILLLIRFAFGYDVRRAFRI 1424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci410g0001 1424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 439 IPR027417 -
Prci410g0001 1424 Gene3D - 180 337 IPR027417 -
Prci410g0001 1424 Gene3D - 343 429 IPR042197 -
Prci410g0001 1424 Gene3D Ribonuclease Inhibitor 908 1033 IPR032675 -
Prci410g0001 1424 Gene3D Ribonuclease Inhibitor 1034 1217 IPR032675 -
Prci410g0001 1424 Gene3D Ribonuclease Inhibitor 570 765 IPR032675 -
Prci410g0001 1424 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 181 - -
Prci410g0001 1424 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 804 IPR044974 GO:0006952
Prci410g0001 1424 SUPERFAMILY L domain-like 894 1201 - -
Prci410g0001 1424 SUPERFAMILY L domain-like 486 919 - -
Prci410g0001 1424 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 155 IPR035897 -
Prci410g0001 1424 PRINTS Disease resistance protein signature 213 228 - -
Prci410g0001 1424 PRINTS Disease resistance protein signature 379 393 - -
Prci410g0001 1424 PRINTS Disease resistance protein signature 782 798 - -
Prci410g0001 1424 PRINTS Disease resistance protein signature 285 299 - -
Prci410g0001 1424 SMART till_3 18 152 IPR000157 GO:0007165
Prci410g0001 1424 ProSiteProfiles Leucine-rich repeat profile. 1074 1096 IPR001611 GO:0005515
Prci410g0001 1424 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Prci410g0001 1424 Pfam TIR domain 19 180 IPR000157 GO:0007165
Prci410g0001 1424 SMART LRR_typ_2 855 878 IPR003591 -
Prci410g0001 1424 SMART LRR_typ_2 1072 1095 IPR003591 -
Prci410g0001 1424 SMART LRR_typ_2 925 948 IPR003591 -
Prci410g0001 1424 SMART LRR_typ_2 761 784 IPR003591 -
Prci410g0001 1424 SMART LRR_typ_2 737 760 IPR003591 -
Prci410g0001 1424 SMART LRR_typ_2 641 664 IPR003591 -
Prci410g0001 1424 SMART LRR_typ_2 995 1018 IPR003591 -
Prci410g0001 1424 SMART LRR_typ_2 808 831 IPR003591 -
Prci410g0001 1424 Pfam NB-ARC domain 195 423 IPR002182 GO:0043531
Prci410g0001 1424 Gene3D - 17 179 IPR035897 -
Prci410g0001 1424 Gene3D Ribonuclease Inhibitor 768 907 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci410g0001 102 884 WRKY Transcription Factor Family AT4G12020 29.565 5.06e-70 258