Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci402g0001 ATGGGACATCGTTGCTGCAGCAAACAGAAGATCAAAAGAGGTCTCTGGTCTCCTGAAGAAGATGACAAGCTCGTCAAATTTATTTCCACTCATGGCCACAAAAGTTGGAGTTCTGTTCCTAAACTTGCAGGGTTGCAGAGATGTGGGAAAAGTTGCAGATTAAGATGGATAAACTATTTGAGACCTGACCTCAAAAGAGGTTCTTTCACTGCCGATGAAGAACAAACCATTATTGACGTTCATAGGATTCTGGGAAATAGATGGGCTCAGATAGAGCATCTACCTGGGAGAACAGACAACGAGGTGAAGAATTTCTGGAACTCATGTATTAAAAAACTCATTTCTCAGGGCTTCGATCCTCAAACTCACAATCTTCTCTCTTCTCATAGACGATCCTCTCTTCCTGTTTCTGTTTCTTCTTCCTCTGCTACTAACAGTCATAAACACCAATGGTTCCATCTTCAGACTGATTCATGA 477 0.4172 MGHRCCSKQKIKRGLWSPEEDDKLVKFISTHGHKSWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFTADEEQTIIDVHRILGNRWAQIAXHLPGRTDNEVKNFWNSCIKXKLISQGFDPQTHNLLSSHRRSSLPVSVSSSSATNSHKHQWFHLQTDS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci402g0001 160 Gene3D - 67 136 - -
Prci402g0001 160 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Prci402g0001 160 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Prci402g0001 160 FunFam Transcription factor MYB86 67 143 - -
Prci402g0001 160 PANTHER MYB DOMAIN PROTEIN 55 1 149 - -
Prci402g0001 160 CDD SANT 68 108 IPR001005 -
Prci402g0001 160 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Prci402g0001 160 SUPERFAMILY Homeodomain-like 10 107 IPR009057 -
Prci402g0001 160 Gene3D - 10 66 - -
Prci402g0001 160 FunFam MYB transcription factor 5 65 - -
Prci402g0001 160 SMART sant 65 113 IPR001005 -
Prci402g0001 160 SMART sant 12 62 IPR001005 -
Prci402g0001 160 Pfam Myb-like DNA-binding domain 66 109 IPR001005 -
Prci402g0001 160 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Prci402g0001 160 CDD SANT 16 60 IPR001005 -
Prci402g0001 160 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci402g0001 1 133 MYB Transcription Factor Family AT3G12720 82.707 4.51e-85 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci402g0001 Myb_DNA-binding 3.7e-15 CL0123