Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci401g0002 ATGGAGGCAGATGGGTCGGGATCTAGAAGGGCAAGTGATGCTGTCCGGTATCGGGGAGTGAGGCGGCGGCCGTGGGGGAAGTTCGCAGCGGAGATTCGGGACTCGGCGAGGCAGGGCCAGAGGGTGTGGCTGGGGACTTTCAACACGGCGGAGGATGCCGCCAGGGCCTACGACAGGGCCGCTTACGCCATGAGAGGCCCATTTGCCGTCCTCAACTTCCCGGATGAATACCCACTTTCGGCCGGCGGTGCCGATGCCGTGGCCGACTCCCGGTCCTCTGCTTCTTCCTCTTCTTCTCTTCCGCCGAGTAGTCATGCGCAGCATGGAAAACAAGTGTTCGAGTTTGAGTACTTGGATGACAAATTGCTGGAGGAGCTTCTTGATTTTGAAGAGACAAGGATGACGGGAAATTGA 414 0.5894 MEADGSGSRRASDAVRYRGVRRRPWGKFAAEIRDSARQGQRVWLGTFNTAEDAARAYDRAAYAMRGPFAVLNFPDEYPLSAGGADAVADSRSSASSSSSLPPSSHAQHGKQVFEFEYLDDKLLEELLDFEETRMTGN 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci401g0002 137 Gene3D AP2/ERF domain 15 75 IPR036955 GO:0003700|GO:0006355
Prci401g0002 137 SMART rav1_2 16 80 IPR001471 GO:0003700|GO:0006355
Prci401g0002 137 ProSiteProfiles AP2/ERF domain profile. 16 74 IPR001471 GO:0003700|GO:0006355
Prci401g0002 137 Pfam AP2 domain 16 66 IPR001471 GO:0003700|GO:0006355
Prci401g0002 137 CDD AP2 16 75 IPR001471 GO:0003700|GO:0006355
Prci401g0002 137 PANTHER DNA-BINDING DOMAIN 13 130 IPR044808 GO:0003700|GO:0009873
Prci401g0002 137 FunFam Ethylene-responsive transcription factor 2 16 75 - -
Prci401g0002 137 MobiDBLite consensus disorder prediction 82 108 - -
Prci401g0002 137 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Prci401g0002 137 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Prci401g0002 137 MobiDBLite consensus disorder prediction 89 106 - -
Prci401g0002 137 SUPERFAMILY DNA-binding domain 16 76 IPR016177 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci401g0002 16 133 AP2-EREBP Transcription Factor Family AT3G23230 54.688 1.91e-39 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Prci401g0002 AP2 1.8e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci401g0002 - - gmx:100775830 151.369