Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci400g0002 ATGAGTTTTATTTTGAGAGGAACAAGAGCAGACATAGAAAGTGGATTTCCTGGATTTATTCCTGAGAGGCATGCATTGCGTGTTCATGCAGCACGACCTGCTAATTCCAATTCTCTCACTTTTCTTGTCACAGTTCTTCTGCTATTCATGATACTGAACTCTCACCAGATGTCACCAAATTTTCTGCTTTGGCTGGTCCTAGGTGTCTTCTTGATGGCTACAATGTTAAGGATGTATGCAACTTGTCAGCAACTTCAAGCTGAGGCTCATGCCCATACAGCAGCGGGCAGTGGTGGCCTTCTTGGGCACACTGAAGTACGATTACATGTGCCATCATCAATGGCACTTACCACCCGAGGACGTCTTCAAGGCCTTAGGCTTCAGCTTGCACTTCTTGACCGGGAGTTTGATGATTTAGATTATGAAACTTTAAGAGCTCTGGATTCAGATAATGCTCCGCCAGCACCTTCCATGACTGATGAAGAGATAAATGCTCTTCCTGTTCACAAATACAAGGGTTCTGGTCTCCAGAACAGGAAATCCTCAATGCAACAGACCTCATCTTCCACCTTTGCTGAGAAGAAGCAAGATGCGTCAAATGCAGTTGGTAGTACAAAGGCCTCTGATGATGAGCTGACCTGCAGTGTATGTTTGGAGCAAGTTAACGTTGGGGATCTACTCCGTAGCTTGCCCTGCTTACATCAGTTTCATGCCAATTGCATTGACCCATGGCTGCGGCAACAAGGGACGTGTCCTGTCTGTAAATTCAGAGCAGGATCTACGTGGAATGAGAGTGAACAGAATGAAGTTGATGCTTCAGACATGGTTTGA 831 0.4561 MSFILRGTRADIESGFPGFIPERHALRVHAARPANSNSLTFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATMLRMYATCQQLQAEAHAHTAAGSGGLLGHTEVRLHVPSSMALTTRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPPAPSMTDEEINALPVHKYKGSGLQNRKSSMQQTSSSTFAEKKQDASNAVGSTKASDDELTCSVCLEQVNVGDLLRSLPCLHQFHANCIDPWLRQQGTCPVCKFRAGSTWNESEQNEVDASDMV 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci400g0002 276 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 186 260 IPR013083 -
Prci400g0002 276 CDD RING-H2_PA-TM-RING 213 255 - -
Prci400g0002 276 PANTHER TARGET OF ERK KINASE MPK-1 5 260 - -
Prci400g0002 276 MobiDBLite consensus disorder prediction 174 205 - -
Prci400g0002 276 SUPERFAMILY RING/U-box 209 258 - -
Prci400g0002 276 ProSiteProfiles Zinc finger RING-type profile. 214 255 IPR001841 -
Prci400g0002 276 Pfam Ring finger domain 213 255 IPR001841 -
Prci400g0002 276 SMART ring_2 214 254 IPR001841 -
Prci400g0002 276 MobiDBLite consensus disorder prediction 175 205 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci400g0002 1 276 C3H Transcription Factor Family AT3G55530 73.285 2.89e-137 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci400g0002 K16283 - gmx:100777936 429.483